Fragaria vesca (woodland strawberry): 101298269
Help
Entry
101298269 CDS
T02666
Name
(RefSeq) nuclear pore complex protein NUP88
KO
K14318
nuclear pore complex protein Nup88
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101298269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101298269
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101298269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
Motif
Other DBs
NCBI-GeneID:
101298269
NCBI-ProteinID:
XP_004308934
LinkDB
All DBs
Position
LG7:complement(18168405..18173413)
Genome browser
AA seq
808 aa
AA seq
DB search
MRFNFDLEETKPEPSRSATPKDEVEWVPLQHHPVFSSTSSAGPSHQPTDSPPLRNLLTWD
GASRLYFWDSDELCLHRISVRLGEPEPTSVSAASPSKVLKPDVKLNFDVNKISINSNGTA
MLLYGSDGLCIMYLYGRTSSRDGTTICRTVTVGPEIYMSGTNVIRILQVSWHPCSDTHVG
ILSSDSVFRLFHLSSDLIQPEQAYYLQPVQPGRSRNATSICPMDFSFGGDHLWDCFSVFI
MFSDGSIYILCPIVPFGSVYKWESIVDIYNDAQTFGLKSPNSTAVSNSNLAISWLEATFP
EIAGQTDGADLSVIKARPYALFDASLLLQGPLRKVSRGEDEANLAFRGAECEGRAVSFLY
NLVSKDSILVTAWSGGQLQIDALADEIQPVWNVGCPPRLRVDSHDNIHGLAMICESTPDK
LSIVKLDQPLDSTLWLGHPPPLLRLAIVDLALPKKTGSDSLIMMFIDPLMLERIYTLHDG
GIDSIVLHYLPFTSQTSGKNETMRTPSVHPVLSTCQGEFSSQSPLSGFVSLSDSFGYSWV
VAVTSYQECIVLEMKTLNLLLPLHVDTEKKSILLEEPKEKDTSDIIISKELLGGPKVVLV
PQTSPNLRSVSADSIEGRSMLHEYFKLFHENYVEYAHKVYFELKHHGPHLKRIIDDQHGR
LVGAKQRLLQFEEKYSDLEDRITNAVQMQNHLEERLKRLRNLPGVHKKPLSTAERDFKSQ
LDQFSGVELDALRSTVNALSARMRRHTQTPKDNLSNKKKLVSRRKDPVQESQISQLKSCL
EKLSLVNSENTKKVKLVESALRSEERSI
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcaacttcgacttggaggaaaccaaaccggagccgagccggtccgcgacgccc
aaagacgaagtggaatgggtcccactgcaacaccaccccgtcttctcctccacctcctcc
gccggcccgtcccaccagcccaccgactctccgccactccgaaacctcttaacctgggac
ggagcctctcgcctttacttctgggactccgacgagctctgccttcaccggatctccgtt
cgcctcggcgagcctgagccgacctccgtctccgctgcctcgccctccaaggtactgaaa
ccagatgtgaagctgaactttgatgtgaacaaaatctccatcaatagcaacgggacggcg
atgctgctttacggttccgatggtctctgcattatgtatctttacgggcgtacttcctcc
agagatggcaccacaatttgcaggactgttactgttggtccagaaatatacatgagtgga
acgaatgtcatacggatactgcaagtttcatggcacccttgcagtgatactcatgtggga
attctttcttctgattcagttttcagattatttcatttgtcttcagatcttattcaacca
gagcaagcgtattatctgcagcctgtgcaaccaggtagatccaggaatgccacatcaatt
tgcccgatggacttttcatttggtggtgatcacttgtgggactgtttcagtgttttcatt
atgttcagcgatggttcaatttacatcctatgtccaattgttccatttggaagtgtctat
aaatgggaatctatagtagatatatataatgatgctcagacatttggcctgaagtcgccc
aactcaacggctgttagtaattcaaatctggctatttcttggttggaagcaacatttcca
gaaattgcagggcaaacagatggagcagatctatctgttataaaagctcgcccttatgct
ttatttgatgcatcactcttattgcaggggcccctgaggaaagtatctcgtggtgaggat
gaagcaaacttagcatttcggggcgcggaatgtgaaggtcgagcggtcagttttctttat
aatctagtcagcaaagattcaattcttgtgaccgcttggagtggtgggcaactgcaaata
gatgccctggctgatgaaatccaaccggtctggaatgtcggttgtcctcctcgccttcgt
gttgattcccatgacaatattcatggtcttgcaatgatctgtgagtcaaccccagataag
ctttcaattgtgaagcttgatcaaccacttgatagtactctttggttgggccatcctcct
cctctgttgagactggccattgtggatctggctctgcctaagaaaacaggaagtgattct
cttattatgatgtttattgatcccctaatgctggaaagaatatacacccttcatgatgga
gggatagattcaattgtgttgcactatctcccgtttacaagtcagaccagtggcaagaat
gagaccatgagaactccttctgtgcatcctgttttaagtacttgccagggagaattctct
tcgcagtctccactttctggttttgtgtcactatcagattcatttgggtattcatgggta
gtggcagtcactagttatcaagaatgtattgtgttagagatgaagaccttaaacctgttg
cttccccttcatgttgatacggagaagaaatccattcttctggaagagccaaaagagaaa
gacacatcagatattatcattagcaaagaactcctaggtggacctaaggtggttcttgtt
cctcagacatcaccaaatttgcgttctgtttctgccgattcaattgaaggtcgatcaatg
cttcatgaatacttcaagcttttccatgaaaattatgtggaatatgcacacaaggtttac
tttgaactcaagcatcacgggccacacttgaagaggataatcgacgaccaacatggtcgt
ttagttggggcaaagcagaggcttttgcaatttgaggaaaagtactcggatttggaagac
cgcattactaacgcagtgcagatgcagaatcatctggaagagcgcctaaaacgcttgcgg
aacttaccgggggttcataagaaaccactttccacagctgagcgggacttcaaatctcag
cttgaccagttttccggagttgagttggacgcattacgttcaactgttaatgcattaagt
gcaaggatgagaagacacacgcaaacacccaaggacaatctatcaaacaaaaagaagctg
gtatctaggaggaaagatcctgtgcaagagtctcaaatctcccagctgaaatcgtgcctt
gagaaactatcactggtcaatagtgagaatacaaaaaaggttaagcttgttgaatctgca
ctgagaagtgaggaaagaagtatatga
DBGET
integrated database retrieval system
