Fragaria vesca (woodland strawberry): 101298342
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Entry
101298342 CDS
T02666
Name
(RefSeq) protein argonaute 16-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101298342
03036 Chromosome and associated proteins [BR:
fve03036
]
101298342
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101298342
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101298342
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
101298342
microRNA pathway
RISC loading complex
101298342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
101298342
NCBI-ProteinID:
XP_004304078
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Position
LG6:complement(29443597..29449060)
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AA seq
889 aa
AA seq
DB search
MEDLPPPPPIIPPNVKPEVVAQAPPKHSIMVRPRGSGTTGRRIALSTNHFKVSVKNPDAV
FYQYCVLITYEDKRPVEGMGIGRKLVDKLYQTYTSEFAGKKFAYDGEKALYTVGPLPRNK
LEFTVILDESFAKSETGKSGETDKRMKRCSTRSKSFNIEISYAAKIPLKSISLALQGAEV
DNTQDALRVLDIILRQKAAKMGCLLVRQSFFHDDSRNFVEIGGGVTGIRGFHSSFRPTQG
GLSLNMDVSTTMIVTPGPVIDFLLTNQGVKEPRFIDWVKAKRMLKNLRVTTRHRNMEGKI
TGLSEQTCNNQTFTLRLRSGDGTSEGETVEITVFEYFVKHCGIELTYSQHMPCVDIGKPK
KPTYVPIELCSLVSLQRYTKALSSLQRASLVEKSRQKPQERIKSVTDALRNYRYDEDPVL
AECGIFIEKQLVQMDGHILETPKLKVGNNEDMLPFKGRWNFKGKSFLDPTRIKSWLVVNF
SGRCDISQISRELINVGKKTGIQIERPITLIEEDRRAERLGPVARVDKMFEQIQSKVQGP
PKFILCVIPKKGSDIYGPWKKKTLVDFGIPTQCIAPPKLSDPYLTNVLMKINTKLGGINS
LLALEFSSRVPLIKDTPTMILGMDVSHGSPGRSDVPSVAAVVGSRNWPLISRYRAAVRTQ
SPKVEMIDGLYKPLPNGNDDGIIRELLLDFYKTSKGRKPTQMIIFRDGVSESQFNQVLNI
ELDQIVKAYQHLGEADVPKFTLIIAQKNHHTKLFQANSPDNVPPGTVVDTNIVHPRIYDF
YMCSQAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHSLSYVYQRSCTAISIVAPICYAHL
AAAQVGQFTKFEDLSETSSAKGSVTTSESIPVPELPRLNEKVQGSMFFC
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttgcctccgccacctcctatcataccgcccaatgtgaagccagaagttgtg
gctcaagctcctcccaagcactctattatggtcaggccacgtgggagtggaactacaggg
cggcgcatagcattgagcactaaccacttcaaagtttcggtgaagaatccagatgctgtg
ttttaccagtactgtgttctcataacttatgaagataagagacctgttgaaggcatggga
attgggagaaagctggtggataagctttatcagacatacacttcagagtttgctggtaag
aagtttgcttatgatggggagaaagctttgtacacagttggtcctctcccgcgcaacaag
cttgagttcacagtcatcctggatgagtcatttgcaaaaagtgaaactgggaagtctggt
gagactgacaaaaggatgaaacgctgttccactcgatctaaatctttcaatatagagata
agttatgctgccaaaatacctctcaagtctatttctcttgcccttcaaggagctgaagta
gacaacactcaggatgcattgagagttcttgatattatcctacggcagaaagcagctaag
atgggatgccttctagtacgacagtcattcttccatgatgactccaggaattttgttgag
attggaggaggtgtgactggtatccggggatttcattccagtttccgtccaactcagggt
ggcttgtccttgaatatggatgtatctacaacaatgattgtgacgcctggacctgttatt
gattttctgttaaccaaccagggtgtaaaagaaccccgcttcattgactgggtaaaggcc
aaaagaatgctgaaaaatttgagggttacaacaaggcaccgtaacatggagggaaaaatc
actgggttgagtgagcagacctgcaataatcagacttttactctgaggctaaggagtggt
gatggcacgagtgagggggagactgtggagattacggtgtttgaatattttgtcaaacac
tgcggcatagagctcacctattctcaacacatgccatgcgttgatattggcaagccaaag
aagcctacttatgttccaattgagctgtgttcacttgtttcactacaaaggtatacgaaa
gcattatcttccctacagagagcatccttagtggaaaaatcaaggcagaagcctcaggag
agaataaagagtgtgactgatgctttaagaaattatcgctatgatgaggatcctgtgctt
gctgaatgtggtatatttatagagaagcaactggttcagatggatggccatattcttgag
actccaaagttaaaggtaggtaacaatgaggacatgttgccctttaagggacgatggaac
ttcaagggaaagtcatttttggatcctacacgtatcaagtcttggctagttgtcaacttc
tctggacgctgtgacattagtcaaatttctcgggagcttatcaatgttggaaagaagact
ggaatccaaattgagcgccccataactcttattgaggaagatcggcgagctgaaagacta
ggccctgttgctagagtagacaagatgtttgaacagattcagtctaaggtccaaggacca
cctaagttcattctctgtgtcataccaaagaaaggctctgatatctatgggccttggaag
aaaaagactctggttgactttggcattccaacacaatgtattgccccgcccaagcttagc
gacccatacctgactaatgtccttatgaaaatcaataccaagctcggaggaataaattct
ctgttggcactggagttctcctcacgtgttcctcttataaaagatactcctacaatgatt
ttggggatggatgtgtctcatggttctcctggccgttcagatgttccttcagttgctgca
gttgttggctctcgaaattggcctcttatatcaaggtacagagcagctgttagaacacaa
tctcctaaggtggagatgattgatggtctatacaagccacttccaaatggaaatgatgat
ggtattatcagggaactgcttctggacttctataagacaagcaaaggacgcaagccaact
cagatgattatttttagggatggagtgagtgaatcacagtttaatcaagtgttgaacatc
gaactggatcaaattgtaaaggcttaccagcaccttggggaggctgatgttccaaagttc
actctcattatagctcagaagaatcatcacacaaagctatttcaagctaatagccctgat
aatgttccaccagggacagttgtcgacaccaatatcgtgcatccaaggatctatgatttc
tacatgtgttctcaggctggcatgattggaacttctaggccagcacactatcatgtcttg
cttgatgagatcggcttttcccctgatgacttgcagaaccttattcactccctttcttat
gtgtaccaaaggagctgtactgcaatatccattgtggcaccgatatgctatgcacacctt
gctgcagcacaagtggggcagttcacgaagtttgaagatctctcagagacttcatctgca
aaaggcagtgtcacaacatcagagagcatcccagttccagagctccctaggctcaatgag
aaggtccagggctccatgttcttctgctaa
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