Fragaria vesca (woodland strawberry): 101298472
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Entry
101298472 CDS
T02666
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101298472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101298472
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101298472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
101298472
NCBI-ProteinID:
XP_004289979
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Position
LG2:complement(6611278..6613873)
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AA seq
428 aa
AA seq
DB search
MDSDESKLFIGGLAWDTTEEKLTDYFNQYGDVSQAVIMRDKITGRPRGFGFVVFSDPAVL
DRVLNDKHTIDGRVVEAKKALSREEQQTSNRTGNFNATRSSGGGGNFKTKKIFVGGLPST
LTEDGFRQFFEEYGSVTDVVIMYDQNTQRPRGFGFITFDTEDAVDRVLQKNFHELNGKLV
EVKRALPKDANPGGGGRGGGYQGYSASGASSNAFDGRMDGNRYMQPQSTAGGFPPYSGYG
AAGYGYGGNTGVGYGGYGSYGVGGYGSATSGFGGPAGSYGNPNSPAGYVSGAPGALKNAW
SSQSPSGYGASGGYAAAASWAAPGGSAPSAPRGQSPSAVSGYGNQGYGYGNYGGSYGSYP
GVYGTSGGRGGSTPTGNSGGGEQQGTRGGYMGSAYGDTNGNAGYSNAAWRADPSQASGGY
GSSQSRQT
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggactccgacgagagcaagctcttcataggcggactggcctgggacaccaccgaggag
aagctcaccgactacttcaaccagtacggtgacgtcagccaggccgtcatcatgcgcgac
aagatcaccggccgcccccgcggcttcggcttcgtcgtcttctctgatcccgccgtcctc
gatagggtcctcaacgacaagcacaccatcgacggccgtgtggtggaagcaaaaaaggct
ttgtcaagagaagagcagcaaacatccaatcgaactggaaattttaatgccactagaagc
tccggaggtggaggaaattttaagactaagaaaatatttgttggaggattgccttccaca
ctgacagaagatggatttcgtcaattctttgaagagtacggcagtgttactgatgtagta
ataatgtatgaccagaacactcaacggcctcgaggatttggtttcataacttttgacact
gaagatgcagttgatagagtactacaaaagaacttccatgagttgaatggtaaacttgta
gaagtaaaacgagcacttcccaaagatgcaaatcctggcggtggaggtcgtggtgggggc
tatcaaggttatagtgcctcgggagccagttcaaatgcatttgatggccgaatggatggc
aatagatatatgcagcctcagtctacggcaggtggtttccctccgtattctggttatggt
gctgcaggttatggttacggtggaaatactggtgttggttatggaggttatggaagttat
ggtgttggtggttatggaagtgccacttctggctttggtggtcctgcaggatcatatgga
aatccaaattcccctgctggttatgttagtggggcacccggtgcattgaaaaatgcttgg
agcagccaaagcccctctggctatggtgcttcaggcggctatgcggctgcagcttcctgg
gctgctccaggtggaagtgctccttctgctcccagaggtcaatcgcctagtgcggtttct
ggttatggaaatcaaggttatgggtatggcaattatggaggaagttacggttcttatcct
ggtgtgtatgggacttctggggggcgtggtggaagcaccccaactggtaacagtggtggt
ggagagcaacaaggaacacgaggtggctacatgggaagtgcatatggtgacacaaatgga
aatgcaggatactctaatgcagcatggagagcagacccttcacaagccagtggtggttat
ggtagttctcagtccaggcagacataa
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