Fragaria vesca (woodland strawberry): 101298557
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Entry
101298557 CDS
T02666
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101298557
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
101298557
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
DUF4131
Motif
Other DBs
NCBI-GeneID:
101298557
NCBI-ProteinID:
XP_004308935
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Position
LG7:18216030..18220726
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AA seq
865 aa
AA seq
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MNSDSDTDSDHSQSGSGSGPARRHSDLSDSIFRSYLEFTGKASATNADLSKIQSFLTSSS
SGALSCLICLERIRPGDPTWSCTSVCFSVFHLFCIQSWARQASDLSALRASTRLPISQSK
AAEVSLWNCPKCRVEYTHSQIPKIYKCFCGKLENPPSDDPWILPHSCGEVCNRPLKHNCG
HRCLLLCHPGPCPSCPKLVEARCFCGNVQDVRRCGFKNFSCNNACEKKLMCGVHCCAEIC
HEGPCPPCRVRGKYRCQCGKREEEKECCERLDFRCEEECEKMLGCGQHKCSKGCHSGECG
PCPFQGKRTCPCGKRVHEGLSCKDAVPLCGATCDKMLSCGYHRCPERCHRGQCLETCRSV
VTKWCRCGSLKKEVPCHQDLTCERKCQRLRDCGRHPCKRRCCDGDCPPCSEICGRKLRCK
NHKCPSPCHRGACAPCPVMVTIACLCGATHFEVPCGTEMDQKPPRCRKPCPITPLCRHGP
NSKPHKCHYGACHPCKLLCEEEYPCGHKCQLRCHGPKPPPNPEFTLKPKKKKSFHPPECT
PGSPCPPCPELVWRSCVGQHFAADRMMVCSDKSLYSCDNLCGNPLPCGNHFCPKTCHPLK
NQSLPSAQQARSEPCEVCHLPCEKERAPACIHPCPLSCHPGDCPPCKVLVKRSCHCGSMV
HVFECIYYNSLSEKEQTAVRSCKGLCHRKLPYCTHLCPETCHPGQCPSPEKCSKKVTVRC
GCQTLKREWLCHDVQAAYRNAGTDPKDITKNQFGLGLLPCDSNCKSKQKIVDSELHSRRP
KVVEVKEPDTDKPVPKRKRRRERGQEVPQISTLQKVFAHVKRFLLVVTLLVLLVTASYYG
YKGLLRLSDWMNEVEEKRQRRHPGI
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggactccgacaccgactccgatcacagccaatccggatccggatccggaccg
gctcgccgccactcggatctatccgactccattttccgatcctacttagaattcaccgga
aaagcctccgccaccaacgccgacctctccaagatccaatcgttcctgacgtcatcctcc
tccggcgcgctgtcatgtttgatctgcttggagcggatccgacccggcgacccgacctgg
tcctgcacctccgtctgcttctccgtcttccacctcttctgcatccagagctgggcgcgc
caggcctccgacttgtccgcgctacgcgcttccacgcgcctcccgatttcgcagagcaaa
gcggcggaggtatcactctggaactgccctaagtgtagagtagagtacactcactctcaa
attccgaagatttataagtgcttctgcggaaaactcgagaatccaccgagtgatgatccg
tggattcttcctcattcgtgcggtgaggtctgtaatcggccgctgaagcacaactgcggc
caccgttgcttgctcttgtgccacccggggccctgcccgtcctgcccgaagctcgtggaa
gctcgctgcttctgcggcaatgtgcaggacgtgaggcggtgcgggtttaagaatttctcg
tgtaacaatgcgtgtgagaagaaactaatgtgtggggttcattgctgcgcggagatttgc
cacgaggggccttgcccgccgtgtagggtgagggggaagtacaggtgccaatgtgggaag
agggaggaggagaaggagtgttgtgagaggttagattttaggtgtgaggaggagtgtgag
aaaatgctggggtgtgggcagcataagtgtagtaaagggtgtcattcgggggagtgtgga
ccgtgcccgtttcaggggaagaggacttgtccgtgtgggaagagagtgcatgaaggattg
tcttgcaaggatgcagtgccgctgtgtggcgcaacttgcgataagatgctcagttgtgga
taccataggtgccccgagaggtgtcatcgcgggcagtgccttgagacgtgcagatcggtt
gtcactaagtggtgtcgctgcgggagcttgaaaaaggaggttccttgtcatcaagatttg
acatgtgaaaggaagtgccagagattaagagactgtggacgccatccttgtaaacgccgc
tgctgtgatggggattgcccaccatgctcggagatttgtggcagaaagcttcgctgtaaa
aaccacaaatgcccatctccctgccatagaggtgcttgtgctccttgccctgtgatggtg
acaattgcatgtttatgtggtgcgacacactttgaggttccttgtggtactgagatggat
cagaagcctcctcgatgtcgtaagccgtgccctattactcctttatgtaggcatgggcca
aatagcaagccgcataaatgccattatggagcttgccacccatgtaaactactttgtgaa
gaagaatacccatgtggccacaagtgccagctaaggtgccatggacctaaacctcctcca
aatccagaatttacattgaaaccgaagaaaaagaagtcttttcatccgcccgagtgtact
cctggttctccatgccctccatgcccagagcttgtttggagatcatgtgtgggccagcac
ttcgcagcggacagaatgatggtctgttcagataaatcattatattcctgtgataacttg
tgtgggaatcctctaccttgtggtaaccacttctgccctaaaacttgccacccgctcaag
aatcagtctttgccatcagcgcagcaagcaagaagtgagccttgtgaagtgtgtcatctt
ccttgcgaaaaggagagagcgcctgcatgtatacatccttgccccttgtcatgtcatcct
ggagattgccctccttgcaaagtgctcgttaagcgatcatgtcactgtggttccatggtc
catgtttttgagtgcatatactataatagtttgtctgaaaaggagcaaacagctgttcgt
tcttgtaagggtctctgtcatagaaagttgccttactgtacgcatctgtgcccagagact
tgtcatcctggtcaatgcccatcacctgagaagtgctctaaaaaggttactgttcgttgt
ggatgccagaccttgaaaagggagtggttatgtcatgatgtgcaggcagcctatcgcaat
gctggtactgatcccaaagatataactaagaatcaatttggacttggactcctaccttgc
gactctaattgcaaaagcaaacaaaagattgttgattcagaattacattcacgcagacct
aaagttgtggaggtgaaggaaccagatactgataagcctgtaccaaaaaggaagagaagg
cgtgaaaggggacaagaagtgccacaaatctcgacactgcaaaaagtttttgcccacgtg
aagcgttttcttttggttgtcacccttctggtgctcttagtcacagcttcatattatggt
tacaagggtctcctccggctatcagattggatgaatgaagtagaagagaaaaggcagaga
agacaccccggtatctga
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