Fragaria vesca (woodland strawberry): 101298561
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Entry
101298561 CDS
T02666
Name
(RefSeq) pre-mRNA-splicing factor 18
KO
K12817
pre-mRNA-splicing factor 18
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101298561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101298561
Spliceosome [BR:
fve03041
]
Complex C
Other components
Step II factors
101298561
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
DUF3138
DUF6414
Motif
Other DBs
NCBI-GeneID:
101298561
NCBI-ProteinID:
XP_004290603
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Position
LG2:15860077..15861994
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AA seq
415 aa
AA seq
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MDDLKKEIEAKRQRLAEETGGKKRYFNRAEMEKKQIQKKREEEKRELEAKLKAKRQSAAS
EAAATGGDASSSKSNTNAAATTTSAAPSSVSKALTDEEKIDMINIPRPEVIRRLRILKQP
ITLFGEDDDARLDRLKHVLKTGMFEVDSDMTEGQTNDFLRDIAELRKRQKSGIVSDRKRK
NSEVVDGVVEDGEGGVREDELDGDGGSSGADVERDTKLMKTNFDQLCDEDKILVFFKRLL
SEWKQELGQMTAAERRAGKKIATLNQCARYLHPLFKFCRKKVLPDDIRRALMVVVDCCMK
RDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVK
RLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLQMETDSGSSQVFEERLRLMPAP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgatctgaagaaagagatagaggcgaagcggcagaggctggcggaggagaccggc
ggcaagaagcggtactttaaccgcgccgagatggagaagaagcaaatccagaagaagcgg
gaggaggagaagcgcgagttagaagccaagctcaaagccaagcgccagtccgccgcctcc
gaagccgccgcgaccggtggcgacgcttcgagttctaagtcgaacaccaacgccgccgcg
accacgacctccgcggcgccgtcctcggtttcaaaagctctgaccgacgaggagaagatc
gacatgattaacatccctaggccggaggtgatccgccggctgaggatcctgaagcagccg
atcactctgttcggcgaggacgacgacgcgaggctcgaccggctgaagcacgtgttgaag
accggaatgttcgaggtcgactccgacatgacggaggggcagacgaacgattttctccgg
gatatcgccgagctgaggaagcggcagaagtcggggattgtgagtgaccggaagaggaag
aattccgaggtggttgacggcgtggtggaggacggcgagggtggggtgagggaggatgag
cttgacggcgacggagggtcgagcggagctgatgttgagagggacacgaagctgatgaag
accaatttcgatcagttgtgtgatgaagataagattttggtgttctttaagaggctgctg
agtgagtggaaacaggagctggggcagatgacggcggcggagaggcgagccgggaagaaa
attgctacattgaatcaatgtgctcgctacttgcatcccttgttcaagttttgcaggaag
aaggttcttccagatgatattcgccgagcattgatggtggtggttgattgctgcatgaag
cgagactacctagctgcaatggaccagtacattaagatggctattgggaatgcaccatgg
ccaattggtgtcactatggttggtatccacgaacgttcagctcgtgagaagatttacacc
aacagtgtggctcacattatgaatgatgaaacaactcgaaaatacttgcagtctgtgaaa
agattgatgaccttttgtcagcgacgctaccctactatgccgtctaaagctgtcgagttc
aacagcttggctaatggtagtgacctgcagtctctgctacaaatggagactgactctggc
agtagtcaagtctttgaggagaggcttcggttaatgcctgctccttag
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