Fragaria vesca (woodland strawberry): 101298656
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Entry
101298656 CDS
T02666
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101298656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fve04040
]
101298656
Ion channels [BR:
fve04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101298656
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Motif
Pfam:
cNMP_binding
Ion_trans
Ac76
Motif
Other DBs
NCBI-GeneID:
101298656
NCBI-ProteinID:
XP_004289089
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Position
LG1:8572700..8576042
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AA seq
618 aa
AA seq
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MEDSVMISSNPDRNILRGQSSRQGGRHRAVTRNITATRWPTPEEAVGMTISEATEETVRA
NEKAFLSTWDHKVFIVSSAFATLVDPLYLYTYIVKDDWKCLTWDDRLVITFLALRTATDL
VYMADFVLYVIYLRRIRRKLKVLRVPSKQKRHDFCTLLLRLYTALPIAQTMTQSFILLPT
FPVQYMLRVYRIYRPLRLRPNVETGVGRWLKAILDFFPFVLAAHLYGALWYILAVHQEID
CWKFSCQNLQCAVTSSSYYCNYEDSLKVNITVLNIMNELCAANSTTFDFGIYLYAFQSGM
TRSRDVPRKMLQGFWWGLQNLSSFGSNLRTTFMFAKNRSTSFNLMEIFFSILLCISGIVL
FLIYLNERVQVSKKISKELKLRRKMQKLNPEIDLWLTKNTLPKSLKMGIMKNMRQKLEEN
NHFDVTAILSVLPLRDRRDIMSHLRLASLKKLPAFENMDERVMKAICEHLKPVIYAEDKY
IFREGEPLEQMLFITQGTAWTYTSISNNSVHESSNCSSVIRCLEKGDFFGEEILEWATNL
KSFSDFPVSRKVVKSQTKVEAFAIRANDLKSVVCKFWWHFSSRELMQLNDPHSRRWQHLA
ASSIQVKWRLRHASRLVT
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccgttatgataagttctaatccagaccggaatattctgagggggcaatct
tcccgtcaaggtggaaggcatagagctgttaccagaaatattactgcaacaaggtggcca
acaccagaggaagctgtcggtatgaccatttctgaagcgacagaggagactgttagggct
aatgagaaagcattcctttcgacgtgggatcacaaggtatttatagtatcaagcgccttt
gccacattagttgatcctctctacctttacacttatatcgtgaaagacgattggaagtgt
ttgacgtgggacgacagattggtcataacttttctggctctacgaacagccacagatctc
gtttatatggcggactttgttctgtatgttatatatctgcggcgaatccgtcgtaagtta
aaggttttgagagttccttcgaaacaaaagagacacgacttctgcacactactgcttcgt
ttgtacactgctctgcccattgcacagacgatgacacagtctttcattcttcttcctacc
tttccagttcaatacatgctaagagtatatcgcatttatcggccgctcaggctacgtcct
aacgtagagactggagtaggaagatggcttaaagctatcctggattttttcccatttgtc
cttgcagctcatctatatggagctttatggtacattcttgctgttcatcaagagattgat
tgttggaaattttcttgtcagaatctacaatgcgctgttacgtcatcttcttattactgt
aactatgaagattctttaaaagttaatatcaccgttcttaacataatgaacgaattatgc
gcagcaaattcaactactttcgattttggtatatatctttatgcttttcagtctggaatg
acaaggtcaagagatgttccacgaaagatgttgcaaggtttttggtggggtctacaaaat
ttgagttcttttggttcaaaccttcgaaccacattcatgttcgctaagaaccgcagcacc
agtttcaatttgatggaaatcttcttttcgattctcctatgtataagtggcatagtgcta
tttttgatatatctcaatgaaagggtgcaggtatcgaaaaaaatatcaaaagaacttaaa
ctgagacgaaagatgcaaaagttgaatccagaaatagatctatggttaacgaaaaacacc
ctccctaaaagtttgaagatgggaatcatgaaaaatatgcgccaaaagcttgaagaaaac
aatcattttgatgtcaccgccatcctctctgttcttcccttaagagatagaagagatatc
atgagccatcttcgtttggcttcacttaaaaaattgccagcgtttgaaaatatggatgaa
cgagtaatgaaagcaatatgcgagcatctcaaaccagtcatatatgctgaagacaaatat
atttttcgagaaggagaaccgttggagcagatgttgttcatcacacaaggcactgcatgg
acttacacatctattagtaataacagtgtccatgaaagttcaaattgttcctcagtcatc
aggtgccttgagaaaggtgatttcttcggagaagagattctagagtgggcaacaaacctc
aaatcattctcagacttccctgtctcgagaaaagttgtcaagtcccaaacaaaagttgaa
gcatttgcaatcagagcaaacgacttaaagagtgttgtttgtaaattctggtggcacttt
tctagtagagagctcatgcaattgaatgatcctcattctcggcgatggcaacatttggcc
gcatcttccatacaagtgaaatggcgacttcgtcatgcaagccggctggttacataa
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