| Entry |
|
|---|
| Name |
(RefSeq) ABC transporter C family member 12-like
|
|---|
| KO |
| K05665 | ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [EC:7.6.2.3] |
|
|---|
| Organism |
fve Fragaria vesca (woodland strawberry)
|
|---|
| Pathway |
| fve04977 | Vitamin digestion and absorption |
| fve04981 | Folate transport and metabolism |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:fve00001]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101298730
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
101298730
04981 Folate transport and metabolism
101298730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:fve02000]
101298730
Enzymes [BR:fve01000]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.3 ABC-type glutathione-S-conjugate transporter
101298730
Transporters [BR:fve02000]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
101298730
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
LG6:38155253..38166291
|
|---|
| AA seq |
1617 aa
MGFKAIDWYCQPEANGVWAKAVSAFGSYTPCAMDSMVICISHLVLLGLCCYRVWMIKKNL
KARRFRLRSNYYNYLLGLLAGYSTAEPLLRLVMGLSLFNPFGRTGFAPFEVTSSFVEALA
WCSMLILIGLETKIYIREFRWYVRFGVLYVLVGDAVVLNLVLGVTDSYSRSALYLYISTV
CCQVLFGILLLIYVPNLDPYPGYIVLQSESLDNAEYEALPGEDQICPERHVNIFSRIYFG
WMTPLMQLGYRKPITETDVWKLDTWDQTETLIKRFQECWVEESKRSKPWLLRALNCSLGR
RFWLGGFFKIGNDLSQFSGPILLNHLLQSMQRGDPAWIGYIYAFLIFMGVSLGVLSESQY
FQNVMRVGFRLRSTLVAAIFRKSIRITHEGRKNFPTGKITNMMSTDANSLQQICQQLHGL
WSAPFRITVAMVLLYQQLGVASLIGSFMLVLMIPIQTTIISKMRKLTKDGLQQTDKRVGL
MNEILAAMDTVKCYAWETSFQQRVQSIRNDELSRFRKAQLLSALNSFILNSIPVVVTVTS
FGVFTFLGGELTPARAFTSLSLFAVLRFPLNMLPNLLSQVVNANVSLQRLEELFLTEERI
LVPNPPLEPGLPAISIQDGHFSWNSKAEKPTLSNINLDIRVGSLVAVVGGTGEGKTSLVS
AMLGELPPIADSSVVIRGTVAYVPQVSWIFNATVRENILFGSEFEAARYWKAIDVTEFRH
DLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVAREVFN
HCIKEELQGKTRVLVTNQLHFLPQVDEIILVSDGTIKEKGTFKDLSENSLLFQKLMENAG
KMEEHVDEKEDSKTNYQEISLPVSNGVVNDLPKDASYTKKGKGMRSVLIKQEERETGVVS
WKILQRYKHALGGLWVVMVLFTCYTLTEVLRVSSSTWLSFWTDQSTSKSYAPGFYILIYA
ILSLGQVTVTLTNSFWLITSSLHAARKLHDALLQAILKAPMVFFHTNPTGRIINRFAKDL
GDIDRTVANFMNMFLGQVWQLISTFVLIGIVSTISLWAIMPLLILFYAAYLFYQSTSREV
KRLDSITRSPVYAQFGEALNGLSSIRAYKAYDRMAKISGRSMDNNIRFTLVNISSNRWLT
IRLETLGGIMIWVIATFAVMQNGRAENQVQFASTMGLLLTYTLNITSLLSGVLRQASRAE
NSLNAVERVGTYIELPSEAPAVIESNRPPHGWPSSGSIKFEDVVLRYRPGLPPVLHGLSF
TVSASEKLGIVGRTGAGKSSMINALFRIVEIEKGSILIDGCDVAKFGLADLRKVLSIIPQ
SPVLFSGTVRFNLDPFSEHNDADLWEALERAHLKDVIRRNSFGLDAEVSEGGENFSVGQR
QLISLARALLRRSKILILDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCD
RILVLDAGQVLEHGSPEELLLNEVSAFSKMVRSTGPSNAQYLRSLVFKGKQNKVNGEETE
QLVGLSQRRWLASSRWAAAAQFALALSLTSSQNDLQRLDIGDEDNILMKTKDAVITLQGV
LEGKHDEDIDISLNQHHIPREGWWSALFRIVEGLAVMSKLAQNRLHPLEDDDFEDNL |
|---|
| NT seq |
4854 nt +upstreamnt +downstreamnt
atgggttttaaggcaatagattggtattgtcaaccagaagctaatggggtatgggccaaa
gcagtgagtgcttttggctcatacactccttgtgcaatggactctatggtcatatgtatt
tctcatttagttcttttgggattgtgctgctatcgagtttggatgatcaagaagaatttg
aaagcccggaggttcaggttgaggtcaaactactataactacttgctgggattgttggct
ggttactccactgctgagcctctactgaggttggtgatgggtttatcactctttaacccg
tttggaagaactggctttgctccttttgaggtgacttcctcgttcgttgaagctcttgct
tggtgctctatgctaattttaattggcttggaaactaagatttacattcgggaattccga
tggtatgtaaggtttggagtcctttatgtcttggtaggagatgctgtggtgctaaatcta
gttcttggagtgacagattcatacagcagatctgctctgtatctgtacataagcaccgtc
tgttgccaggtgctgtttggaattcttcttctcatctatgttccgaatttagatccttat
cctggctacattgttctgcaatctgagtcacttgacaatgctgaatatgaagcactacca
ggagaagatcaaatttgccctgagcgtcatgttaatatattttccagaatatattttgga
tggatgactccactcatgcagctagggtacagaaaacccatcaccgaaacagatgtttgg
aagttggacacatgggatcagaccgagactttgattaaaaggtttcaggaatgttgggtt
gaagaatctaaaaggtccaaaccatggcttctgagagcactgaattgtagccttggacga
aggttctggttgggaggctttttcaagatcggcaatgatctctctcagttttcgggtccc
attctattaaatcatctcttgcagtcaatgcaacggggtgatccagcttggattggttat
atatatgccttcttaattttcatgggtgtgtcattaggtgtgctctctgaatctcagtat
ttccagaatgttatgcgtgtcggttttcggttgagatcaaccttggttgctgctatattc
cgtaaatctataagaataacacatgagggccgcaagaattttccaactgggaagattacg
aatatgatgtctacagatgctaattcactccagcaaatatgccaacaacttcatggacta
tggtccgctcctttccgtatcactgtagctatggttcttctctaccaacaattaggtgtt
gcatcgcttattggatccttcatgctagttctcatgattcccatacagacaactatcatc
agcaaaatgcggaaactgacaaaggatggactgcaacagactgacaagagagttggcctc
atgaatgaaattctagctgccatggacactgtgaaatgttatgcctgggagacaagtttc
cagcagcgagttcaaagtataaggaacgatgagctctcaaggttccgtaaagcgcaatta
ttatctgctttgaacagttttattctcaacagcatcccagttgttgtgacagtaacttcg
tttggggtattcacttttcttggaggtgaattgacacctgcgagggcgtttacatcactt
tctctttttgcagtgctgcgcttccctttaaacatgctgcccaatttattaagtcaggtc
gtaaatgcaaacgtatccttgcagcgtttggaggaactatttttaactgaggagagaatt
ctagtacctaacccaccactggaaccagggcttccagccatctcaattcaggatgggcac
ttttcatggaattcaaaggcagagaaacccacattatcaaacatcaacttggatatacga
gttggtagcttagttgcagttgttggcggcactggagaaggaaaaacatcacttgtatca
gccatgcttggggagctgcctccaattgcagattccagtgttgtaataagggggactgtt
gcttatgttccccaagtttcatggattttcaatgctactgtacgtgaaaacattttattt
ggatctgaatttgaagctgcacggtattggaaggcaattgatgtaactgagttccgtcat
gacctggacttacttccaggtcgagatcttacggagataggtgaaagaggggtcaatatt
agtggaggtcaaaagcaaagggtttcaatggccagagctgtatattctaattcagatgtt
tatatatttgatgacccattaagtgctctagatgctcatgttgctagagaggttttcaac
cactgcataaaggaagagttgcaggggaaaactagggtgcttgtcacaaatcagctacac
tttctgcctcaagtggatgaaataatattagtctctgacggtacaattaaagagaaggga
acctttaaggatctctctgaaaacagtttgctgttccagaagcttatggaaaatgccggg
aaaatggaagaacatgtagacgaaaaggaagacagcaaaactaattaccaggaaatctca
cttcctgtgtctaatggggtggtgaatgacttgccaaaagatgcaagctacaccaagaaa
gggaaagggatgagatctgtactcattaagcaagaggaacgggaaacaggtgttgtaagt
tggaaaattttgcagaggtataaacatgcattaggaggcctatgggtggtcatggttcta
tttacatgttatacactgacagaagttcttcgagtttcaagcagcacatggttaagtttt
tggacagaccaaagcacgtcaaagagttatgcacctggtttctacattcttatttatgca
attctatcacttggtcaggtaacggtgactctgacgaactcattttggctaatcacttca
agtcttcatgcagccagaaaattgcatgatgccctgctacaggctatactaaaagctcca
atggtcttctttcacactaacccaactggaaggataatcaataggtttgcaaaggatctg
ggtgacatagatcgcactgtagccaattttatgaacatgtttctgggtcaagtgtggcag
ctcatttcgacttttgtgctcataggtatagtgagcacaatatccctctgggccataatg
ccacttctaattttgttctatgcagcctatctattctatcagagcacatcccgtgaagtg
aaacgcttggattccattaccagatctcctgtttatgcacagtttggagaagcattaaat
ggtttgtcatcaattcgtgcctataaagcttatgatcggatggcaaagatcagtggaagg
tctatggataataacatcagattcacccttgtgaatattagttcaaaccgctggcttacg
ataaggttggaaacactaggaggtatcatgatatgggtgatagcaacctttgctgtcatg
caaaatggaagagcagaaaaccaagtacaatttgcatccacaatgggtctacttcttact
tatactttgaatatcacaagtctgttgagtggtgttcttagacaagctagtagggctgaa
aatagtttaaatgctgttgagcgggttggaacatatattgaattgccttctgaggctcca
gctgttattgaaagcaaccgtcccccacacgggtggccatcatcaggatcaatcaagttt
gaggatgttgtcctccgttataggcctggacttccaccagtactgcacggattatccttc
acagtttctgcaagtgagaagttaggaatagttggaagaactggtgccggcaaatctagc
atgattaatgcattgtttaggatagtagaaatagaaaaaggaagcatcttgattgatggg
tgtgatgttgctaagtttggattggcagatttgcgaaaagttcttagcatcataccccaa
tcaccagttctcttttcaggaactgtacggtttaatcttgatcctttcagtgagcataat
gatgctgacctctgggaagccctagaaagggcgcatctaaaggatgtcattagaaggaat
tccttcggtctcgatgctgaggtttcggagggtggtgagaatttcagtgttggacagagg
cagctaataagtcttgctagagcattgctacggagatcaaagattcttattcttgatgaa
gcaacagcagctgtggatgttagaacggatgctctcatccaaaaaaccatacgtgaagaa
ttcaaatcatgcaccatgctcattattgctcacagactgaacaccattattgactgtgat
cgaatccttgttcttgatgctggtcaggtcctagaacatggttcaccagaagaattactg
ctaaatgaagtgagcgcattctccaagatggttaggagtacaggaccttctaatgctcag
tacttacgcagcctggttttcaaaggcaagcagaataaggtgaatggagaggaaactgag
caactggttggcctgagtcagaggagatggttagcctcttcgcgctgggccgctgctgcc
caatttgcattggctttaagtctcacatcctcacagaacgatctccaaaggttagatatt
ggagacgaggacaatattctcatgaaaacaaaggatgcagttataacattacagggagtt
ttggaaggaaagcatgatgaagatatagacatatcactaaatcagcaccatattccaaga
gaagggtggtggtcagctttgttcagaatagttgaaggtttggccgtgatgagcaagctg
gctcagaacagacttcaccctttagaagacgacgattttgaagacaacctatag |
|---|
