Fragaria vesca (woodland strawberry): 101298992
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Entry
101298992 CDS
T02666
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101298992
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
101298992
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
101298992
NCBI-ProteinID:
XP_011463184
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All DBs
Position
LG4:complement(19335277..19344366)
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AA seq
1601 aa
AA seq
DB search
MDQNQRSSSSASASRAYQFHPARAAIVHLFDLYLGKSNRLKSEDSIPEPPNKSQKRVLAL
NRELPPRNEQFLLDFEQLQSQFPDQDQLRVVTESVLISLVVQCSNHAPRAEFLLFALRSL
CTIGHINWDTFLPALLSSVSTAEMSMGQGSQAMAGVSSQSSMLPTSNTIQNSSNFQSSNP
ASPLPSVHGIGSPGQSAMETMTVSPAKSSDMPSSGQQAAARANTSIRDNAISSLRQLCCK
IILTGLGFNLKPVTHADIFSHMLNWLVNWDQKQPGTDESDGVKSWRSGKALIEWLHSCLD
VIWLLVDEEKCRVPFYELLRSGLQFMENIPDDEALFTLILEIHRRRDMMAMHMKMLDQHL
HCPSFGTHRIFPQTTPSISGEAVASLRYSPITYPSVLGEPLHGEDLAISIPKGSLDWERA
LRCIRHAICTTPSPDWWKRVLLVAPCYRGPSQGPTPGAVFTSEMICEATIDRIVELLKLT
NSDVNCWQDWLVFSDIFFFLIKSGCVDFVYFVGKLVSRLTESDPHILRTNHVTWLLAQII
RVELVINALNSDARKVETTRKILSLHKEDRNSDPNSPQSILLDFISSCQNLRIWSLNTTT
REYLNNEQLQKGKAIDEWWRHASKGDRMMDYMNMDDKSIGMFWVVSYTMAQPACETVINW
LSSAGVAESLPATNLQSNERLMVMREVNPLPMSLLSGFAINLCLKLAYQMEDSLFCGQVV
PNIAMAETYCRLLLIAPHSLFRSHFNHLAQRSPNVLSKPGVTLLVLEILNYRLLPLYRYQ
GKSKALMYDVTKIISALQKKRGDHRVFRLAENLCMNLILSLRDFFLVKREGKGPTEFTET
LNRATVVTLAIIIKTRGIADADHLHYLQTMLEQILENSNHTWSEKTLRYFPSLLRDLLIP
RIDNRGIAIQAWQQAETTVINQCTQLLSSSPDPTYVMTYINNSFFQHRKYLCAGAWILMQ
GHPENVNSVNLARVLREFSPEEVTANIYMMVDVLLHHIRLELQHGHSLQDLLLKACANLT
FFIWTHELLPLDIMLLALIDRDDDPHALRIVISLLDRQELQQRVKLYCMNRGAPEHWLYP
GPFVRVELQKALGNHLSWKDKYPTFFDDIAARLLPVIPLIIYRLIENDAMDSADRVLAIY
TPFLAYHPFRFTFVRDILAYFYGHLPGKLIVRILNVLDISKIPLSESFPQHINSSNPVIC
PPPDYFATLLLGIVNNVIPPLHNNSKSGSASDALNNSMRAPPNKTPATSQSKQTNASEGQ
KSFYQIQDPGTYTQLVLETAVIELLSLPVSASQIVSSLVQIVINIQPTLIQSSNGLHGAT
NGVGQGSVLPTSPSGGSTDSLGTNRSSPSVSGINVSSFVSRSGYTCQQLSCLLIQACGHL
LAQLPPDFHVQLYIEASRIIKETWWLTDGKRSPGELDSAVGYALLDPTWAAQDNTSTAIG
NIVSLLHSFFSNLPMEWLEGTHLIIKHLRPVTSVAMLRIVFRIMAPLLPKLANAHNLFNK
ILSLIFSMMVDVFGKNAQPSTLVEPLEVTDLIDFFHHIVHYEGQGGPVQANSKPRPEVLV
LCGRAAESLRPEIQHLLLHLKPDTNSSIYAATHPKLAQNTS
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaaccagagatcatcatcgtccgcttcagcttcccgagcttaccagttccac
cctgctcgtgccgccatcgtccatctcttcgacctctacttaggaaagagtaaccgcctg
aaatcggaggattcaattcccgagcctccgaacaagtcacagaagcgtgtgcttgctctc
aacagagagcttcctcctcgaaacgagcagttccttctcgatttcgagcagctccagagc
cagtttcctgatcaagatcagctgcgtgttgtgacagagtcggtgcttatatctctagtt
gtgcaatgcagcaatcatgcaccacgcgcggagtttcttctgtttgctttaaggagtttg
tgcactataggtcacattaactgggacacttttttgccggccctgctttcgtcagtctca
actgcagagatgtcgatgggtcaagggagccaggcaatggctggtgtttcatcacagtcc
agcatgcttccaacttcaaatacgattcagaattcatctaattttcagtcttcaaatcct
gcctctccattaccttctgttcatggtattggctcccccggccagtcagctatggaaact
atgactgtctcgcctgctaaatcatctgatatgcccagtagcggacagcaggctgcagca
agggccaatacatctataagagataatgctatcagcagtttacgtcagttgtgttgcaaa
attattttgactggacttggatttaatttaaaacctgtaactcatgccgacattttttct
catatgctgaattggctggttaattgggatcaaaaacaaccggggactgatgaatctgat
ggcgtaaaatcttggagatctgggaaggcactaattgaatggctgcatagctgtttggat
gttatttggcttttggttgacgaggaaaaatgccgagttcccttctatgaattactccgc
agtggcttgcaatttatggagaacatacctgatgatgaagccctgtttactctaatctta
gagatccacaggaggcgagatatgatggctatgcacatgaaaatgcttgatcaacacttg
cattgcccttcatttgggactcatcgaattttcccgcagactactcctagtatatcaggt
gaagcagtggcaagcttgcggtattcaccaatcacatatccaagtgtacttggagaacca
ttgcatggagaggaccttgcaatttctattccaaaaggaagtttagattgggagagagca
ttgcggtgtataaggcatgctatttgtactactccatcacctgactggtggaaacgtgtg
ctgcttgtggctccttgttataggggtccttctcaaggtcctactcctggtgctgttttc
acttctgaaatgatttgtgaggcaacaattgatagaattgttgagctactgaagttgaca
aattcagatgttaattgctggcaagactggcttgtcttttcagatatattcttttttctt
ataaaaagcggctgtgttgatttcgtctattttgtcggcaaactagtttcacgccttaca
gagagtgatccccatattcttaggaccaatcatgtcacttggcttctagctcaaattatt
cgggttgagcttgtgataaatgctctaaattcagatgctagaaaggtagaaacaactcgg
aagatcctatcgcttcataaagaagatagaaactcagatccaaatagtcctcaaagtata
ctgcttgactttataagcagttgccaaaatttacgtatttggtccctgaacacaacaact
agagaatatctgaataatgagcagcttcagaaaggaaaggcaatagacgaatggtggaga
catgcaagcaaaggggatcgtatgatggattatatgaatatggatgataagtcaattggg
atgttttgggttgtatcttacaccatggcgcaaccagcttgtgaaactgtgatcaattgg
ttatcctctgctggagttgcagaatcgttaccagcaacaaacctacagtccaacgagagg
ttaatggttatgcgtgaagtaaatccattgccgatgtcattgttatctggctttgcaata
aacctatgtttaaagctggcatatcaaatggaagactctctgttttgcgggcaggttgta
cctaatattgcaatggctgaaacttattgcaggttactgctcattgcacctcattcacta
ttccgttctcatttcaatcatttggcacaaaggagtcctaatgtattgagcaagcctggt
gtaactcttttggtgcttgaaattttgaactatcggttgcttccactttacaggtaccag
gggaaaagcaaagctttgatgtatgatgttacaaaaataatatctgctctgcaaaaaaaa
cgtggagaccatcgtgtatttagattggctgagaatttgtgtatgaatcttattctgtca
ctgcgagattttttcttagtgaaaagggaagggaagggtccaactgaattcacagaaact
ctgaatcgagcaactgtggtcactcttgctatcatcattaagacaagaggaattgctgat
gctgatcatctgcattatcttcaaaccatgttagagcagatattagagaatagtaatcat
acatggtcagagaaaacactacgctatttcccttcgcttcttcgtgacctgttgattcct
cggatagataacaggggcattgcaattcaagcatggcagcaggcagaaaccactgtgatc
aaccaatgcactcagcttctgtcgtcatcacctgatcctacttatgttatgacctacata
aataatagtttttttcaacaccgtaaatatctatgtgctggagcatggatcctgatgcaa
gggcaccctgagaatgtaaacagtgtaaacttggcacgtgtcttgcgagaattttcccct
gaggaagtaacagctaatatttacatgatggtggatgtattgcttcatcacattcgattg
gaacttcagcacgggcattccttgcaggaccttttactgaaagcatgtgcaaacctaaca
tttttcatttggacccacgagttacttcctttggatattatgcttttggcacttattgat
cgggatgatgatccccatgctttgcgtattgtgattagtttacttgataggcaagaactt
caacaaagagtgaaactatattgtatgaatcgaggtgcccctgagcactggctttacccc
ggacccttcgtacgagttgaattgcaaaaggcccttggaaatcatctttcctggaaggac
aagtatcccacatttttcgatgacattgcagcgcgtttgctcccggtcattccattaata
atctatagactaattgaaaatgatgccatggattcagcggacagagtactggccatctat
actccatttcttgcttaccacccttttagatttacatttgttcgtgacattcttgcatat
ttctacggccatcttcctggaaagcttattgttcgaatcctgaatgtactcgatatcagc
aagattccattgtctgagtcatttccgcagcacatcaattcatcaaatcctgttatatgc
ccacctccggattactttgcaactctcctgctgggaatagtgaataatgttatacctccg
ttgcataacaactcaaaatctggatcagctagtgatgctttaaacaactcaatgcgtgct
ccacctaacaagactccagcaacctctcaatctaagcaaacaaatgcttctgagggccaa
aagtcattttatcaaattcaggatcctggcacatatactcagctcgttcttgaaacagca
gtcattgaattactgtctcttccggtatctgcatcccagattgtatcttctcttgttcaa
attgtcatcaatatacaaccaacactaattcaatccagcaatggcctgcatggagctaca
aatggtgttgggcaaggctcagtattaccaacatccccttcaggtggcagcacagattcc
ttaggcacaaacagatcaagtccgtcagtttcaggaataaatgtttctagctttgtttct
cggagtggttatacgtgccaacaattgtcttgcttattaatccaagcatgtggtcatcta
ctggctcagctccctcctgattttcatgtacaactctatatagaggcatcacgtataata
aaagaaacttggtggctcactgatggcaagagatcaccgggggaactagactctgctgtt
ggttatgctttgttggatccaacgtgggctgctcaagacaacacctccacagctattggt
aatattgtttctctgcttcattcatttttcagtaacctaccaatggaatggctggaaggg
acccatcttatcatcaaacatctcaggccagtgacatcagttgcaatgttgagaatagtg
ttccgtataatggctccattgctcccaaagcttgccaatgctcacaacctcttcaataag
atcctctcattgatttttagtatgatggtcgacgtctttgggaagaatgcacagccatca
actcttgttgagccactagaagtgacagaccttatagacttcttccatcatattgtccac
tatgaaggacaaggagggcctgtgcaggctaacagcaagccgagaccagaggttttagtt
ctgtgtggaagagctgcagaaagtctacgcccagagatacagcatcttcttttgcacttg
aaacccgacacaaattcttccatttatgctgctactcatcctaagttggcacagaacaca
tcataa
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