Fragaria vesca (woodland strawberry): 101299095 Help Entry 101299095         CDS       T02666                                  Name (RefSeq) ATP-dependent RNA helicase DHX36   KO K14442   ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] Organism fve  Fragaria vesca (woodland strawberry) Pathway fve03018   RNA degradation Brite KEGG Orthology (KO) [BR:fve00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     101299095  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:fve03019]     101299095    03012 Translation factors [BR:fve03012]     101299095 Enzymes [BR:fve01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      101299095 Messenger RNA biogenesis [BR:fve03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      101299095 Translation factors [BR:fve03012]  Eukaryotic type   Initiation factors    Initiation associated factors     101299095 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  OB_NTP_bind HA2_C Helicase_C DEAD HA2_N dsrm AAA_22 ATPase AAA_19 T2SSE nSTAND3 AAA_16 Myosin_head Motif Other DBs NCBI-GeneID:  101299095 NCBI-ProteinID:  XP_004301269 LinkDB All DBs Position LG5:complement(10352886..10360693) Genome browser AA seq 1216 aa AA seqDB search MPCSAFLIRTTATMSLKPRLRHCRHVALLRPSLLLSCFMNTNNALYHTHSVTGLLRWNSA QAADVVCMSSSRAAERSTDWKPARRRKDAAVPSWCHQRQQGYGRFAYQDASASEDSDREF GSSGQSSRREMTGATLENIDEWRWKLTMLVRNKDEQEVVSRERKDRRDFDHLAELARGMG LYSRQYSKVVVFSKVPQPNYRPDLDDRRPQREVVLPFGLHKDVDAHLRAHLSQKPMNRGN LSHNSMSRSNGNGSIAKNGGLYEQEEPLIQNSVAMERILQQRSLRLRNKQQEWQESVEGQ KMLELRRSLPAYKEKDFLLKAVSENQVIVVSGETGCGKTTQLPQYILESEIEAGRGGVCS IICTQPRRISAMSVSERVAAERGENLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLV DRKLKGVTHVIVDEIHERGMNEDFLLIILKELLLHRPELRLILMSATLNAELFSSYFNGA PMIHIPGFTYPVRAHFLENILEMTGYRLNQYNQIDDYGQDKTWKMQKQAQAFKKRKSQIA STVEDALEAADFRGYSPRTQESLSCWNPDSIGFNLIEHVLCHIVRKERPGAVLIFMTGWD DINSLKDQLQSHPLLGDPNRVLLLACHGSMPSAEQRLIFDKPEDGVRKIVLATNMAETSI TINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKAASRQRRGRAGRVQPGECYHLYPRC VYDAFADYQLPELLRTPLQSLCLQIKSLQLGSIAEFLSKALQSPEPLSVQNAVDYLKIIG ALDENEDLTVLGRHLSTLPVEPKLGKMLILGAIFNCLDPIMTIVAGLSMRDPFMMPYDKK DLAESAKAQFAGRDSSDHLALIRAYDGWKNAERSQSGYEYCWRNFLSAQTLKAIDSLRKQ FFFLLKDAGLVDNTENCNTLSHDEHLIRAIICAGLFPGICSVVNKEKSISLKTMEDGQVL LYSNSVNATVPKIPYPWLVFNEKVKVNSVFIRDSTGVSDSVLLLFGGNISRGGLDGHLKM LGGYLEFFMNPALANTYVSLKRELEELIHNKLLDPKSDMQSHNNLLAALRLLVSEDRCDG RFVYGRKMPVPSKKITKEIGPGTLRVRDNGNSGGNNSKSQLQTLLVRVGHEAPTYKTKQL KNNQFCSTVIFNGLNFVGEPRNSKKEAEKEAAAEAVLWLKGENHSSSRDIDHMSMLLKKS TKKIRRTTSLDIAKWS NT seq 3651 nt NT seq  +upstreamnt  +downstreamnt atgccttgctccgccttcttaatccgcaccaccgccaccatgtccctcaaaccccgcctc cgccactgccgccacgtcgccctactccgcccctcgcttctcctctcttgcttcatgaac accaacaacgccctctaccacacccactccgtcaccggcttgctccgatggaactccgcc caggccgctgacgtcgtgtgcatgtcatcttcgcgtgcggcggagaggtcgacggattgg aagcccgcgcggcggcggaaggacgccgccgtgccgagctggtgccaccagcggcagcag gggtacgggagatttgcgtaccaggacgcctcggctagtgaagattcggaccgtgaattc gggtcgtcgggtcagagttctcgccgggaaatgactggtgcgactcttgaaaacatcgat gagtggagatggaagttgaccatgcttgttcgcaacaaagatgagcaagaagtggtgtcg agggaaaggaaggacagacgtgattttgatcatcttgcagaactggcaagagggatgggt ttatatagccgtcagtattcaaaggttgtagtctttagtaaagtccctcagccaaattac agacctgatctggatgataggcgaccacagagagaggtcgtcttaccttttggactgcat aaagatgttgatgctcatctcagagctcatctttctcaaaagccaatgaacagaggaaat ttgtcgcataattcaatgtcaaggtcaaatggtaatggaagtatagctaaaaatggggga ctctacgagcaggaggaacccttaatacagaatagtgttgccatggagagaattcttcag cagagaagcttgcgattgcggaataagcaacaagaatggcaggaatctgtcgaaggtcaa aagatgcttgaacttcgtagaagtctgcctgcatataaggagaaagatttcttgttaaaa gccgtatctgaaaatcaggtcatagttgtctcaggtgaaacaggttgtggtaaaactaca caacttcctcagtacattttagagtctgagattgaagctggtcgtggaggtgtctgtagt attatttgtactcaacctagacgaatatctgccatgtctgtttctgaaagagttgctgca gaacgaggggagaatctgggggaatcagttggttataaagttaggctggaaggaatgaag ggcagggacacgcggcttcttttttgcaccacaggcatactattgaggagattacttgtt gacagaaagttgaaaggtgttacacatgtcattgttgatgagatccatgaacgtggaatg aatgaagattttcttcttatcattctgaaagaacttctcttgcatcgccctgagttgaga ttgattttgatgagtgcaactttaaatgctgagcttttctcctcgtactttaatggtgct ccaatgatccatatacctggttttacatacccagtccgagcacattttctggagaatatt ttagaaatgactggatatcggttaaatcaatataatcaaattgatgattatggtcaagat aagacgtggaaaatgcagaaacaagctcaagctttcaaaaagaggaagagtcaaattgca tctaccgttgaggatgcacttgaagctgctgactttagggggtacagtccaaggactcag gagtctctttcatgttggaacccggactccattggttttaatcttattgaacacgtgctt tgccacatagtcaggaaagaacgacctggtgctgttttgatttttatgactggttgggat gacataaactccttgaaggatcaactccaatctcatcctcttttaggagatcctaatagg gtcctgctgcttgcatgtcatggttccatgcctagtgctgaacagaggttgatatttgat aaaccagaagatggggttaggaaaatcgttctggctacaaacatggctgagaccagtatc actatcaatgatgtagtatttgtgattgattgtggaaaggcgaaagaaacatcatatgat gcactcaataacactccctgtttgcttccatcctggatatcaaaggctgcgtcccggcag agaaggggaagagccggtcgtgttcaacctggcgagtgttaccatctttatccccgatgt gtatatgatgcctttgctgattatcaattgcctgaacttttgaggacgcctctgcagtct ctatgtttacagatcaagagtctacagcttggaagtattgctgagttcctttctaaggca ctgcagtcaccggaaccattgtcggttcaaaatgctgttgattatttgaagatcattggg gctttagatgaaaatgaagatctcacagtattaggtcgccatctgtcaacgcttccggtt gagccaaaacttgggaaaatgcttatattaggggctatcttcaactgtttagatccaata atgactattgttgcaggcctgagtatgagagatccattcatgatgccatatgacaagaag gatcttgcggaatcggcaaaagcgcaattcgctggccgtgatagcagtgatcatcttgct cttatccgagcatatgatggctggaaaaatgctgaaagatcacaatctggttatgagtac tgctggagaaattttctttctgcacaaactctaaaagccattgactctcttcggaagcag ttcttctttttgctcaaggatgcaggtttggttgacaacaccgagaactgtaatacattg agccatgatgaacatcttatccgagcaatcatctgtgcgggattatttcctggaatatgt tctgttgtgaacaaagagaagtccatttcgttgaaaacgatggaagatggacaagtactt ctatactcgaattcagtcaatgctacggtgcctaaaattccatatccatggctagtgttc aatgaaaaggtgaaagtgaattcagtattcatccgggactcaactggtgtatctgattct gtgctgcttttgtttggagggaacatttccaggggtgggctggatggacacctgaagatg ttgggaggatacttggagtttttcatgaatcctgcattagcaaatacatatgttagcttg aagagggaacttgaggaactgattcataataagcttctagatcccaaatcggacatgcaa tctcataataacctcctagcagccctaagattactggtctctgaagaccgatgtgatgga agatttgtctatggccgcaagatgccagtaccctccaagaagataacaaaagagatagga ccaggcaccttgagggttcgcgataatggtaatagtgggggtaataattccaaaagtcag ctgcaaacattgcttgtcagagtaggtcatgaagctcccacctacaaaaccaaacaattg aaaaacaaccagttttgttccacagtgatcttcaacgggttgaactttgtaggggagcct cgcaatagtaagaaagaagcagagaaggaagcagctgctgaagctgtgctctggttaaag ggcgagaatcattcatcttccagagatattgaccatatgtcaatgcttctaaagaagagt acaaagaaaatccgtagaacgacctcattagatattgccaagtggagttga

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