Fragaria vesca (woodland strawberry): 101299294
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Entry
101299294 CDS
T02666
Name
(RefSeq) protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fve03036
]
101299294
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101299294
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
VGPC1_C
Motif
Other DBs
NCBI-GeneID:
101299294
NCBI-ProteinID:
XP_004298634
LinkDB
All DBs
Position
LG4:23028815..23033916
Genome browser
AA seq
749 aa
AA seq
DB search
MKRSLDDYEISDDEWEEDHASSFKPSRVLNNKPPPRAPPPPAIESFAYKRGRASSADDAD
FVVDISDGSDDDCVEIKDDDLEDDDVEEEVVRSRPVTRGRRFVVEDEDSDGDWAELESSS
EEEEEEEAEAVGDDDVVGRALQKCAKISADLKRELHGSSAAATASDRYAEVDASSVRIVT
QDDINEACRSDQSDFLPVLKPYQLVGVNFLLLLYRKGIGGAILADEMGLGKTIQAVTYLM
LLKHLHKDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAARSAYSRELTSLAKAGM
PPPFNVILVCYSLFERHSAQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVAR
SANQRLMLTGTPLQNDLHELWSMLEFIMPDLFTTEDVDLKKLLSTADTDLISRMKSILGP
FILRRLKSDVMQQLVPKIQRVEYVIMEKEQNDAYKEAIEEYRAASRARIAKTSQANTNSI
IGVIPRRQISNYFVQFRKIANHPLLVRRIYSDEDVVRFARKLHPMGAFGFECTLDRVIEE
MKSFNDFSIHRLLLSYDITDKKGCLPDEDVMLSAKSQALAELLPILKQAGHRVLIFSQWT
SMLDILEWALDVIGVTYRRLDGSTQVTERQTIVDTFNNDTSIFACLLSTRAGGQGLNLTG
ADTVVIHDMDFNPQIDRQAEDRCHRIGQTKPVTIYRLVTKGTVDENVYEIAKRKLVLDAA
VLESGLEMENEGAASEKTMGEILSKLLLG
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagcctcgacgattacgaaatctccgacgacgagtgggaggaggaccacgcc
tcctccttcaagccctcccgcgtcctcaacaacaaaccaccgccccgggccccacccccg
ccggcaatcgagtccttcgcctacaagcgcggccgcgcctcctccgccgacgacgccgat
ttcgtcgtcgacattagcgacggctccgacgacgattgcgtggaaatcaaggacgacgat
ttggaggacgacgacgtcgaggaggaggtcgtccgcagccgcccggtgacgcgcggaagg
aggttcgtggtggaggacgaggacagcgacggggattgggcggagctggagtcgtcgagt
gaggaggaggaggaggaggaggcggaggcggtgggggacgatgacgtcgtcgggagagct
ttgcagaagtgcgccaaaatctcggcggatttgaagcgggagctacacggctcgtcggcg
gcggcgacggcgagtgatcggtatgctgaagtggacgcttcgtctgtgaggattgtcact
caggatgacattaacgaggcgtgtaggtcagaccagtccgattttctgcctgttctcaag
ccataccagctggttggtgttaactttcttcttctgttgtatcggaagggtattggagga
gccattttggcagacgagatgggtctagggaagactattcaggctgtaacatatttgatg
ctattgaaacatttacacaaggacccaggtccccatttgattgtatgtcctgcttcagta
ttggagaactgggaaagagaacttaaaaagtggtgcccttcgttttctgttctccagtat
cacggggctgcgcgttccgcatattcaagagagttgacgtcattggccaaagctggaatg
ccgcctcctttcaatgttattcttgtgtgctattcactatttgaaagacacagtgcgcaa
cagaaagatgatcgtaagattctgaaacgttggcgttggagttgtgttcttatggatgag
gctcatgctctgaaggataaaaacagctataggtggaagaacctaatgtctgttgcgcga
agtgcaaaccagcgtctaatgctgacaggaacacctctacaaaatgatttacatgagcta
tggtcaatgctagagtttattatgccagatctttttactactgaggatgttgacttaaaa
aagctattaagtactgcagatacggatttgatcagtcggatgaaatccatattgggacca
tttattttgagacgtttgaaatctgatgtaatgcaacaacttgtccctaaaatacaacgg
gtggagtatgttatcatggaaaaggaacaaaatgatgcctataaagaagccattgaggag
tatcgtgcagcttcacgagctcgtattgcaaaaacttcacaggctaatacaaacagtatc
attggagttattcctcggcggcaaatctctaactattttgttcagtttcgtaagatcgca
aatcatcctttactagtaaggcgtatttacagtgatgaggatgttgttcgttttgccagg
aagttacatccaatgggtgcatttggctttgaatgtactttagacagagtaatcgaggaa
atgaaaagtttcaatgacttttctattcaccggcttttactatcttatgatatcactgat
aaaaagggatgtcttccagatgaagatgttatgctttctgcaaagtctcaggcattagct
gaacttcttcctatactgaagcaagctgggcatcgagttctgatatttagccagtggaca
tcaatgcttgatatcttggagtgggctttggatgtgataggggttacatacagacgactt
gatggaagtactcaggtaacagaaagacagacaatagttgatacattcaacaacgacact
tctatatttgcatgcttgctgtccacaagagctggaggccagggtttgaacttgaccgga
gctgatactgtagtcatacacgatatggatttcaacccacaaattgatcgacaggcagaa
gatcgctgtcatcgcattggccaaacaaagcctgttaccatatacaggctagtgaccaag
ggtacagttgatgaaaatgtttacgagattgccaagaggaagttagtgcttgatgctgct
gtcctcgagtctggcttagagatggaaaatgaaggcgcagcatctgagaagactatgggg
gagatattatcgaaacttttgctgggttag
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