Fragaria vesca (woodland strawberry): 101299309
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Entry
101299309 CDS
T02666
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101299309
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fve01009
]
101299309
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101299309
03019 Messenger RNA biogenesis [BR:
fve03019
]
101299309
03041 Spliceosome [BR:
fve03041
]
101299309
Enzymes [BR:
fve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
101299309
Protein phosphatases and associated proteins [BR:
fve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
101299309
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101299309
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101299309
Spliceosome [BR:
fve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101299309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
101299309
NCBI-ProteinID:
XP_004302273
LinkDB
All DBs
Position
LG6:3393131..3395991
Genome browser
AA seq
322 aa
AA seq
DB search
MMMMTMEGMMDKGVLDDIIRRLLEGKGGKQVQLSEAEIRQLCVNARQIFLSQPNLLEVRA
PIHICGDIHGQYQDLLKVFEQGGYPPAANYLFLGDYVDRGKQSLETICLLLSYKIKYPDK
VFLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVSALIDGKILCMHGGLS
PELENLDQIKELPRPTDIPDNGLLCDLLWSDPDARIDGWAESDRGVSCTFGADRVIDFLD
KNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALMSVDEALLCSFEILK
SSADEASSSRLTLKKPPKAGKI
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgacaatggagggaatgatggataaaggtgtgttggatgatattataagg
aggctattggaaggcaaaggaggaaaacaagtgcagctttcagaggcagagatccgtcaa
ctttgcgtcaacgcccgccaaatcttcctttctcagcctaatcttcttgaggttcgagcc
ccaattcacatatgcggtgatatacatggacaataccaagacctactgaaagtatttgaa
caggggggttaccctccagctgcaaactacctgtttctcggagattatgtggatcgaggc
aagcaaagcttggagacaatttgtttacttctgtcctacaaaataaaataccctgacaaa
gtcttccttttaagaggaaaccatgaagatgcaaagattaaccggatatatgggttctat
gacgagtgtaaaaggcggttcaatgttaggctttggaaaattttcactgactgctttaat
tgtttgcctgtgtctgcacttattgatgggaagatactttgtatgcatggtgggctctca
ccagagttggaaaacttggatcaaataaaggaacttccaaggccgactgacattccagat
aatggtctgttatgtgatttgctttggtctgatcctgatgctagaattgatggctgggca
gagagtgatcgtggtgtttcctgtacttttggagcagatagagttattgactttttagac
aagaatgaccttgatctcgtctgtcggggtcatcaggtggttgaggatggttatgaattt
tttgcgaaacgaagattagtcactatattctcagctcccaactacggaggggagttcgat
aatgccggcgctctaatgagtgttgatgaagctctactgtgttcgtttgagatacttaaa
tcaagtgctgatgaagcctcaagtagtcgtttaactcttaaaaagccgcctaaagctgga
aagatctga
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