Fragaria vesca (woodland strawberry): 101299339
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Entry
101299339 CDS
T02666
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fve03009
]
101299339
04121 Ubiquitin system [BR:
fve04121
]
101299339
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
90S particles
Other 90S particles
101299339
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101299339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Sof1
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_IP5PC_F
VID27
Motif
Other DBs
NCBI-GeneID:
101299339
NCBI-ProteinID:
XP_004290302
LinkDB
All DBs
Position
LG2:11172054..11177561
Genome browser
AA seq
452 aa
AA seq
DB search
MKVKVISRSTDEHTKERSQDLQRVFHNYDPTIRTQEKAVEYVRALNAAKLDRIFAKPFVG
AMDGHVDAISCMAKNMNHLVGIFSGSMDGDIRLWDIASRRTVQRFPGHQGAVRGLAVSTD
GRVLVSCGTDCSVRLWAIPISTAMELDVLTDNSVEPLETYVWKNAFRSVDHQWNFDRFAT
GGAGVDIWNHNRSAPEQSLEWGTDTVISVRFNPGQPELLATSASDRSIALYDLRMGKPTT
KLIMATKTNSICWNPMEPFNFTAANEDCNCYSFDCRKLNAATCVHKDHVSAVMDIDYSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKYSCDASYVISGSDDTNLRLWK
AKASEQLGVLLPREKKRHEYLEAVKNRYKHLAEVKRIVRHRHLPKAIYKTTALRRTMIEA
ERRREEKRKAHSAPGSSTSKPLRQRRIVRVEE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaagtaatatcccggtccacagatgaacatacaaaagaacggagccaagac
ctccagagagtgttccacaattacgaccccaccattcgaacccaagagaaggccgtggag
tatgttcgtgcgcttaatgccgccaaattagacaggattttcgcaaagccgtttgttgga
gcaatggatgggcatgtagatgctatttcgtgcatggccaaaaacatgaaccatttggtt
gggatattctccggttctatggatggagatattcggctttgggatatagcttccaggcgc
acagttcagcggtttcctggccaccaaggtgctgtgcgaggtttagcagtatctacagat
ggacgggtacttgtttcttgtggaactgattgcagtgtcaggctctgggccatacctatt
tccactgctatggagctagatgtccttactgataactctgttgagcctctggaaacttat
gtgtggaaaaatgcatttaggtctgttgatcaccaatggaattttgatcgttttgccaca
ggtggagctggtgtagatatatggaaccacaacaggtctgcaccagaacagagtctcgaa
tggggaacagacacagttatatctgtccggtttaatcctggacagcctgaacttttggca
acatctgcaagtgatcgcagcatagcattatatgacttgcgcatggggaaaccgacaacg
aagcttatcatggcgacaaaaaccaattctatttgttggaatccaatggagccattcaac
ttcactgctgcaaatgaggactgcaactgctatagctttgattgtagaaagcttaatgca
gcaacgtgtgtgcacaaagatcatgtctctgctgtgatggacatagattattcaccaact
ggtcgagaatttgtaaccggatcatatgatagaacagtgagaattttccagtataatggt
ggtcacagtagggagatttatcatacaaagagaatgcaaagggttttctgtgtcaagtac
agctgtgatgctagttatgttatttctgggagtgatgacactaatcttaggctttggaag
gctaaagcatcagaacaactgggtgttcttcttccaagggaaaagaaaaggcatgaatat
ctggaagctgtcaagaatcgctacaagcacctcgctgaagtgaagcgtatagtgaggcac
cgccacttgccgaaagcaatatacaagacaactgctctccggcgtacaatgattgaagca
gaacgcaggagagaagagaagaggaaagctcacagtgccccaggaagctctacatcaaag
ccattacggcagagaagaattgtgcgtgttgaggagtga
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