Fragaria vesca (woodland strawberry): 101299414
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Entry
101299414 CDS
T02666
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fve03400
]
101299414
Enzymes [BR:
fve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
101299414
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
101299414
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
DUF3410
Motif
Other DBs
NCBI-GeneID:
101299414
NCBI-ProteinID:
XP_004287812
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Position
LG1:complement(8554295..8558270)
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AA seq
603 aa
AA seq
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MKIVTYNVNGLRPRIAQFGSLLKLLNSLDADVICFQETKLRRQELTADLVMAEGYESFFS
CTRTSERGRAGYSGVATFCRVKSAFNSDEVALPVSAEEGFSGLLGEVAAVAEGLEEFSNE
EMLQVDGEGRCVVTDHHHFVLFNLYGPRAGGDDTERIEFKLKFYKMLQKRWESLLRQGRR
IIVVGDLNIAPTCLDRCEAEPEFENNQFRRWFRSMLVENRGSFFDVFRSKHPDRREAYTC
WSQSSGAEEFNYGSRIDHILCAGLCLHQEQDLQNHNFVACHVKECDILTQYKRWKPGNSL
RWKGGQRTIKLEGSDHAPVYTSLLEMPSICQHSTPRLSARYIPMVRGLQQTLVSMLMKRK
VAEQVDGHQESCSETEASSPDQCGTPCSSSSQEFEVLGSRTIESSSSFANEAACNTLVTS
CSEPTKTMPGNETKKKAKGSQLSQLSLRSFFQKSSIPSKSNSANSGIDVPPTQIDILESH
HLPNETSIPENQNGNLEQCELHSSASIRDGNQDELIASSKKEKNSLALLEWQRLHQVMQN
SIPLCKGHKEPCVARVVKKQGPNFGRRFYVCARAEGPASNPEANCNYFKWAASKPRNNKP
NKG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtgacgtacaacgtcaacggcctgaggccgcgaatcgcacagttcggctct
cttctcaaattgctgaattccttggacgctgacgtcatctgcttccaggaaactaagctg
cgacggcaggaattgaccgccgatttggtaatggcggagggctacgagtcgttcttctcc
tgcaccaggacctccgaacgaggccgcgctggatattccggtgtggctacgttttgccga
gtgaagtcggcgttcaacagtgatgaggtggcgctgccggtgtcggcggaggaagggttc
agcggtttgctcggagaggtggcggcggtggcggaagggcttgaggagttttcgaatgag
gagatgcttcaggttgatggagagggacggtgtgttgttactgatcatcatcattttgtt
ctgttcaatttgtatggaccaagagctggaggtgacgatacggaaaggattgagtttaag
ctcaagttttataagatgttacagaaaagatgggagtctctcctgcgtcaggggaggagg
ataattgttgttggtgatctgaacattgcacccacttgtttagatcgttgtgaagcagaa
ccagaattcgagaacaatcaattcagaagatggtttagatccatgttggtggaaaataga
ggctctttctttgatgttttcagatcaaaacatcctgatagaagagaagcatacacatgc
tggtcacaaagtagtggtgctgaagaatttaattatggctccagaattgatcacattctt
tgtgctggtttatgtttgcaccaagagcaggaccttcaaaaccataactttgtagcttgc
cacgtcaaggagtgtgacatattgacacagtataaacggtggaaaccaggaaattcactg
aggtggaagggagggcagaggaccatcaaacttgaaggctcagatcatgcacctgtttac
acaagtctactggaaatgcctagtatctgccaacatagtaccccacgtttatctgctaga
tacattccaatggttcgtggtctccagcaaacccttgtttcaatgttaatgaagaggaaa
gttgctgaacaagtggacggacatcaagagagttgcagtgagacagaggcaagctcgcct
gaccaatgtggtacaccctgttcttcttcaagccaagaatttgaagttctcggttcaaga
acaatcgagagttccagcagttttgctaatgaggctgcttgtaacaccttggttacctca
tgtagtgagcctaccaaaacaatgccaggaaatgaaaccaagaaaaaagcaaaaggcagt
caactgtcccaactctcattgagatcatttttccagaaaagctcaatccctagcaagagc
aacagtgcaaacagtgggattgatgttccaccaactcagatagatattttagaatctcat
catctgccaaatgaaacttccattccagagaatcaaaacggtaatctagagcagtgtgaa
ttgcactctagtgcatcaattcgggatgggaatcaagatgaactcattgccagttcaaag
aaagagaagaatagtttagctttactggagtggcaaaggttacatcaagtcatgcagaat
agcataccactttgcaagggtcataaagaaccttgtgttgctcgggttgtgaagaaacaa
ggtcctaattttggtcgcagattttatgtttgcgcacgtgctgagggacctgcatcaaat
cctgaagccaattgtaattatttcaaatgggccgcttcaaaacctcgaaacaacaagccg
aacaaaggatga
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