KEGG   Fragaria vesca (woodland strawberry): 101299696
Entry
101299696         CDS       T02666                                 
Name
(RefSeq) coatomer subunit beta'-3-like
  KO
K17302  coatomer subunit beta'
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:fve04131]
    101299696
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fve04147]
    101299696
Membrane trafficking [BR:fve04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    101299696
Exosome [BR:fve04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   101299696
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_WDR75_2nd WD40_RFWD3 TPR_GEMI5 WD_LRWD1 Clathrin WD40_like
Other DBs
NCBI-GeneID: 101299696
NCBI-ProteinID: XP_004287086
LinkDB
Position
LG1:complement(441204..449780)
AA seq 897 aa
MPLRLDIKRKFAQRSERVKSLDLHPTEPWILASLYSGTVYILNYQSQTMAKSFEVSELPV
RSAKFVTRKQWVVAAADDMCLRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDHTVKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAFGYMKGSRRIVIGYDEGTILVKIG
REVPVASMDSSGKIIWAKHNEIQTVNIKSVGADFEITDGERLPLAVKELGTCDLYPQNLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRETTSKIKIFSKTFQ
EKKNIRPTFSVEHIYGGTLLAMCSNDFVCFYDWVDCRLIRRIDVNVKNVYWADSGDLVAI
ASDSSFYILKYDRDIVSSYFESGRPVDELGVEDAFELLFEINERVRTGLWVGDCFVYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRLFLIDKEFNVMGYSLLLSLIEYKTLVM
RGDLERAKEIFPTIPQEQHNSVARFLESRGMLEDALEVATDPDYKFDLAIQLGNLEIAKE
IATKAQSESKWKQLGDLALSSGKLELAEDCLLHGLDYSGLLLLYSSLGDAQGISKLASLA
KEQGKNNVAFLCLFMLGKLEECIQLLLDSERIPEAALMARSYLPSKVSEIVSIWRNDLNK
VNKRAAESLADPKEYPNLFEDWEISLSLESNRTETSGNYQPAEQYPVYASEKPASSLVEL
FKSMHIDEEEAAPVENGDLDHEEVEENEEDPGEEHTIEEDSDSMNGVVLVNGTHEEE
NT seq 2694 nt   +upstreamnt  +downstreamnt
atgcctctcaggcttgacattaagcgtaagtttgcgcaaagatccgagagagtgaagtct
ttggatctacatccaactgaaccatggatccttgcaagtctgtactcagggaccgtgtat
atcttgaactaccagtcacagactatggctaagtcatttgaagtctctgaattgccagtt
cggtcagcaaaatttgtaacacgaaagcaatgggtagttgctgcagccgatgacatgtgt
ttacgcgtatacaattacaataccatggataaggttaaagtcttcgaggcgcacactgac
tacattagatgtgtggctgtccatcccacgcttccatatgttttatcatcttctgatgac
atgctcatcaaactgtgggactgggaaaaagggtggatgtgtactcagatatttgaaggg
cattctcactatgtcatgcaagtgacatttaatcccaaagacaccaacacttttgcgagt
gcttccctcgatcacactgtaaagatttggaatcttggctcgcctgacccaaactttaca
ttggacgcccacctgaaaggagtgaattgcgttgattacttcactggtggtgataagccg
tacttaatcacaggatctgatgatcatactgcaaaggtatgggactatcaaaccaaaagt
tgtgttcagacacttgaaggacacactcataatgtatctgcagtatgcttccaccctgaa
cttccgattataattactggttctgaggatggaactgttaggatttggcattcgaccact
tacaggcttgaaaacaccttgaattatgggctggaacgtgtttgggcttttgggtatatg
aaaggatcacgtcggattgttattggttatgacgaaggaaccattttggtaaaaattggt
agagaagtgccagttgctagcatggatagtagtgggaaaataatctgggccaagcataat
gaaatccaaactgtgaatatcaaaagtgtgggagcagattttgagattacagatggagaa
aggttaccattggccgtgaaggagttgggaacctgtgatctttatcctcaaaatttgaag
cacaaccccaatggaaggtttgttgttgtttgtggagatggagagtacataatatacacg
gctctagcatggagaaatagatcctttggctccgcattggagtttgtctggtcgtcagac
ggagaatatgctgttagggaaacgacatcaaagatcaaaattttcagcaaaacattccag
gaaaagaagaatattcgaccaacattttctgttgaacacatttatggggggacactattg
gcaatgtgttcaaatgactttgtctgcttctatgactgggtggattgcagattgattaga
cgaattgatgtcaatgtgaagaatgtttattgggctgatagcggtgatctggtggccatt
gctagtgattcatcattttacattctgaaatatgatagggatatagtctcttcttatttt
gagagtggaaggccagttgatgaactaggtgttgaagatgcttttgagctcctctttgag
ataaacgagcgtgtccgaactggattatgggttggcgactgttttgtttataataactcc
tcctggcggctcaactactgtgttggtggagaggtgaccacaatgtttcatttggaccgg
cccatgtacttgttgggatatcttgccaatcaaagtcgtctttttcttattgataaagag
ttcaatgtcatgggatactccttgcttctcagcttgattgagtacaagacacttgttatg
cgtggagatttagagcgtgccaaagagatttttcctacaattccccaagagcaacataac
agtgtggcccgatttttggaatctcgtgggatgttggaggatgcactggaagtggctaca
gatcctgactacaaatttgatcttgctatacagctgggtaatctagagattgcaaaggaa
attgctactaaagcacagagtgaatccaaatggaagcagctgggagatttagctctgtcc
tctgggaagttagaacttgctgaagattgcctattacatggactggactattctggcttg
ttacttctgtattcttctcttggagatgctcaaggaatatcaaaacttgcttcacttgct
aaagagcaaggaaagaataatgttgcattcctttgtttgttcatgctgggtaaattggaa
gaatgcatccagctgttgctagatagtgagcggatacctgaagcagcattgatggcacga
tcttacctacccagcaaggtgtcagagatagtttcaatctggagaaatgacctgaacaag
gttaataaaagagctgcagaatctttggcagatcccaaagaatatcctaatttgtttgag
gactgggagatttctctttcccttgagtctaaccgcactgaaaccagtggcaattatcaa
ccagctgaacagtacccagtctatgcttctgagaagccagctagcagccttgttgaatta
ttcaaaagcatgcacattgatgaagaagaagcagccccagttgaaaatggagatctggat
catgaggaggtagaggagaatgaagaagatccaggtgaagaacataccattgaggaggat
tcagactccatgaatggtgttgttcttgtgaatggcacccatgaggaagagtag

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