Fragaria vesca (woodland strawberry): 101299721
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Entry
101299721 CDS
T02666
Name
(RefSeq) uncharacterized LOC101299721
KO
K08518
syntaxin-binding protein 5
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101299721
Membrane trafficking [BR:
fve04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101299721
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
101299721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_VPS8
Beta-prop_THOC3
Beta-prop_EML_2
WD40_Prp19
WD40
Synaptobrevin
WDR55
PEP5_VPS11_N
Beta-prop_WDR5
NBCH_WD40
CPSF_A
Dor1
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
101299721
NCBI-ProteinID:
XP_011469924
LinkDB
All DBs
Position
LG7:complement(18312487..18319667)
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AA seq
1168 aa
AA seq
DB search
MLAKLFKISLQKQQHHPQARVSQADLDPRVVFHYGIPSTASILALDRTQSLLAIGTLDGR
IKVIGGDNIEGLLISPKPLAFKYLEFLENQSFLVSVSSENEIQVWDLEHKQIAGSLQWEC
NITAFSIIYGTNYMYIGNEYAMVSLVKYDAEDQKIKLLPYYITSNFIAEAAGMSLPDTLS
VVGVLHQPSSPGNRLLIAYENGLLVLWDALQDQVVLVRGSKDLQVKEETVHSYPRGKRTE
LSDAKSDSKQVEKEISSLCWVCDDGSTLAVGYVDGDIMFWDLSTAASTKDHRSKNIANNV
AKLQLSSDDKRLPVIVLHWSANRLNNHPRGQLFVYGGGGIGSEEVLTVLSVDWSSGIESL
KCLGRVDLTLVGSFADMVLLPAAGAMENGDILLFTLTNQGQLHVYDEACLSALMSQEKKK
TDGTAVQYPVFIPTTEPCMTVAKLALVDRDGKYSSPLCKQVAVDKSNAENTLNKGGAKWP
LTGGVPSQLRDDYHVEKLYVAGYQDGSVRIWDATYPALSLIYAISPEVKGIRSTGANGTV
SALEFCSLTLKLAIGDVCGLVRLYKLIGRPDKTEVHFVTKTEKEVYSSQQGNGPQCTAVF
SILDSAICILQYTNFGARLAVGYECGQVAMLDISTSSVLFLTDTVSNSSSAVICLHVKSF
SDTNSLSQSSLGSESKNSTDPEIGMKPKDSESETVSDSGNGLAIPKDSESKNVADPEHGM
SVKDTESKTLSKAESGLVFVMTRNAHIVVLDSGTGNMIRSWPLHPKMDSTAIALYIIEDG
DILCDMSSAKKQSSDSPHKGEVKLDNVPPNADSGGTQLVVDPDTSIKTAYFVQRSLNICV
LLCCDNTLHLYSLKSALEGDSNSILKVNLVKLCCWTTIFKKDGKDSGLVVLYPTGVFEIR
SFPNLEVVREISLITILRWNFMTNMDKTICSSDRGQIILVKGCELAFVSLFAYEDDFRIS
ESFHCLHDKVLAAATDVITNLSLRQKQSAAHGILGGFIKGLKASKTDKNMDPSQPTGNHE
TYCANLESLFSNPPFLKPSTDVKDSQEPVMLNLDDIVIDGPITVYPKDQKTKGEKKADKG
SEKKTLFEGTTSDTKPKPRTAAEIKARYRETGDVAAAAARAREMLAERQQKLEKLSENTE
ELASGAQDFASMAKELAERMESRKWWQL
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgttggctaaactcttcaagatatccttacaaaaacaacaacaccatcctcaggcaagg
gtgtcacaagctgatttggatccaagagttgtatttcactatgggattccatctactgca
tcaattctcgcacttgatcgcactcagagcttgttggcaattggaaccttggatggcagg
ataaaggtgattggtggcgataatattgaagggcttctgatatctcctaagccattggcg
tttaaatacttagagttcttagaaaatcaaagttttctagttagtgtctcaagtgaaaat
gaaattcaggtttgggatttggaacacaagcaaatagctggttctttacagtgggaatgc
aatataactgccttctctattatttatggcaccaattacatgtatattggaaacgaatac
gcaatggtgtctttggtgaagtatgatgcagaagatcaaaaaatcaaattactgccgtat
tatattacttcaaacttcatagctgaagcagctggaatgtcattgcctgatactctttct
gttgttggagttctccatcaacctagttctccgggaaacagactgctgattgcatatgag
aatggtctgcttgttctctgggatgctttacaagatcaagttgttcttgtaagaggttcc
aaggaccttcaagtgaaggaagaaacagtccatagttatcctagaggcaaaagaactgag
ctttctgatgctaaatcagacagcaaacaggtggagaaggagataagctctctttgttgg
gtatgtgatgatgggtcgactcttgccgttggctatgtagatggtgatataatgttttgg
gatttatcaactgctgcctctaccaaggatcatagatctaaaaatatagctaacaatgtt
gcaaagctacagttatcatcagatgacaagagactccctgtcatagttttacactggtct
gcaaataggttgaataatcatcctaggggacaactatttgtttacggaggtggaggaatt
ggatctgaagaagttctcacggttctcagcgtggattggtcttcaggaatagaaagtctg
aaatgcctaggtcgtgtagaccttacacttgttggttcatttgcagatatggttttattg
ccggctgctggagcaatggagaatggtgacatattgctattcactttgacaaatcaggga
caactgcatgtctatgatgaggcttgcttgtctgccttgatgtctcaggaaaagaaaaaa
actgatgggacagcagtgcagtatcctgtgttcatacctactaccgaaccttgtatgaca
gtggcaaagcttgctttggtcgatagagatgggaaatactcttcacctctgtgtaagcaa
gttgctgttgacaagtctaatgcggaaaacactttgaacaaggggggtgcaaagtggcct
ttgacgggtggtgttcccagccaacttcgtgatgattatcatgttgagaaactatatgtg
gcaggatatcaagacggatctgttcgaatatgggatgccacctatccagctctgtcgctt
atctatgctataagtcctgaggtaaaaggtatcagatccacaggtgcaaatggaacagta
tcagcattggaattttgttctcttactttaaaattagctattggtgatgtgtgtggtctg
gttcgactgtataaactaatagggcgtccagacaagacagaagtgcactttgtgacaaaa
acagaaaaggaagtttattcttcacaacaaggtaatgggcctcagtgcactgctgtgttt
tctattcttgattctgctatatgcattctacaatataccaattttggagcaagacttgct
gtggggtatgaatgtggccaggttgcaatgcttgatattagtacatcgtcagttttgttt
cttacagacactgtatccaactcaagttccgcagtcatctgtctgcatgtgaaatcattt
tcagatactaatagcttatcacagagctctttgggctctgaatccaagaattcaactgat
cctgaaattggaatgaaaccaaaggattctgaatccgagactgtaagtgattctggaaat
gggttggcaatcccaaaggactctgaatccaagaatgtggctgatcctgaacatggaatg
agtgtaaaagatactgaatccaagactttgagtaaggctgaaagtggattggtgtttgtc
atgaccagaaatgcacatattgttgttttagatagtggaactggtaatatgatccggtcc
tggcccctgcatcccaaaatggattctactgcgattgcgctgtacataatagaggatggt
gatattttatgtgatatgtcgagtgcaaaaaagcaatcttcagactcacctcacaaaggc
gaagttaaacttgataacgtaccaccaaatgctgactctggagggacacagcttgtagtt
gacccggatacctccatcaaaactgcatactttgtgcagagatcgctgaacatatgtgta
ttactttgttgtgacaacacattgcacttgtattcattaaagtctgcacttgagggtgac
agtaactccattctgaaggtgaatcttgtaaaactgtgttgctggactacaatcttcaag
aaagatgggaaagacagtggtttggtagtactctatccgacaggagtatttgaaatcagg
tcttttccaaatcttgaagtggtgagagagatatcactaataacaattctaagatggaac
ttcatgactaacatggataagacaatctgttcttctgatcgtggacaaataattctggta
aaggggtgtgaattagcttttgtatctctttttgcctatgaagatgacttcaggatttcg
gagtccttccattgtcttcacgataaagtgcttgcagctgctacagatgtcattaccaat
ttatctcttaggcagaaacagagtgctgcccatgggattttaggaggtttcattaagggc
ttaaaagcgagcaaaacagataagaacatggatccaagtcagccaactggaaatcatgaa
acatattgtgcgaatttggagagcttattttcaaaccccccattcttgaaaccttccaca
gatgtgaaggatagccaagaacccgtgatgcttaacctagatgatattgtaattgatgga
cctattactgtctatcctaaagatcaaaagaccaagggggaaaagaaagcagacaaggga
tcagagaagaaaacgttatttgaaggcacaactagtgatacaaagccaaaaccaaggaca
gctgcagaaatcaaggctagatatagagaaactggggatgtcgctgcagcagctgcacgc
gcaagagaaatgcttgcagaacgtcagcaaaaactagagaaactcagcgaaaacacagaa
gaactagcgagtggagctcaagacttcgcatcaatggcaaaggaactggccgagagaatg
gagagtcgtaaatggtggcagctatga
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