Fragaria vesca (woodland strawberry): 101299842 Help Entry 101299842         CDS       T02666                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism fve  Fragaria vesca (woodland strawberry) Pathway fve03018   RNA degradation Brite KEGG Orthology (KO) [BR:fve00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     101299842  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:fve03019]     101299842 Messenger RNA biogenesis [BR:fve03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      101299842   mRNA degradation factors    5'-3' decay     Decapping complex      101299842 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 TFIIA Motif Other DBs NCBI-GeneID:  101299842 NCBI-ProteinID:  XP_004294192 LinkDB All DBs Position LG3:11446517..11453465 Genome browser AA seq 820 aa AA seqDB search MERVESGSSIQEAPCSVPQDLTQFGVNSSGEVFDASQYAFFGQDSVEEVELGGLEDEEET AVGLEEEEFLYNKEEVGVSLSDADDLALTFEKLNKDVSGPRSTGIFGDRGSRESSSAAEW VQESFPNWIDEELFDAESMQDGKRWSSGPFSSIHPTEAKHLYRASSYPEPPQLPQQQQQH QHQYFSSEPVMVPKSTFTSYPPPGGRSQQGSPNHQSSHMNIPYAGGPQGGISSPNLSPYS NSPLQMTGLPHGSHFGGNLPHLTPGHPVNSRPLQQWANQSGSYGDHPSHLNNLLQQQLSH QNGLPPQLMHQPQQPHPRMHHPVQQPFSHISAMQSQLFNPHLPPSPPLMNKFEAMFGLSD IRDERSRLAQKGRQNMRFSQHGFDTGGYRSGGGWAPFRSKYMTADEIEGILRMQLAATHS NDPYVDDYYHQYCLARKSAGAKMTHHFCPTQLRDLPPRARANTEPHAFLQVDALGRVPFS SIRRPRPLLEVEPPNSSSPSNSEQKVSEKPLEQEPMLAARVTIEDGLCLLLDVDDIDRFL QFNQLQDGGTQLRHRRQSLLEGLAASLQLVDPLGKNDHTDGPALKDDFVFLRLVSLPKGR KLLAKYLQLLFPGGELMRIVCMAIFRHLRFLFGVLPSDPRAAETTNNIARVVSSCVRGMD LGALSACLAAVVCSSEQPPLRPIGSSAGDGASLVLNAVLDRATELLTDPNAASNYNMTNR ALWQASFDQFFGLLTKYCVNKYDTIMQSLLLHAPTNMAVIGSDAARAISREMPVELLRAS LPHTDDHQRQLLLNFTQRSMPVGGSNNHDGAHINSESVLS NT seq 2463 nt NT seq  +upstreamnt  +downstreamnt atggagagggttgagagtgggagtagtattcaggaggctccctgttctgttcctcaggat ctcacccaatttggagttaattcttcaggcgaggtctttgatgcatcacagtatgcattt tttggtcaagattctgttgaagaagttgagttgggaggtttagaagatgaagaggagact gcagttgggcttgaagaggaggaatttctatataacaaagaagaggttggtgtgtctcta tctgatgctgatgatctagctttaacttttgagaagttgaacaaggatgttagtggacct aggagcaccggaatatttggtgatagaggatccagagaaagttcatctgctgctgaatgg gtgcaggaaagtttccctaactggattgatgaagaattatttgatgctgaaagcatgcaa gatggaaaaagatggtcctccggaccgttttcatccattcatcctacagaagcaaagcat ttgtacagagcgtcttcatatcctgagcccccacagctgccacagcagcagcagcaacat caacatcaatatttttctagtgaacctgttatggtgccaaagtctacttttacttcatat ccacccccaggtggcagatctcagcagggttcgcctaaccaccaatcaagccacatgaat atcccttatgctggtggacctcagggtggaatatcttcaccaaacctttctccgtactct aactctccacttcaaatgactgggttacctcatggatcacattttggtggaaatttgcca catctgactcccggtcatccagttaatagtcgtcccctccagcaatgggccaaccaaagt ggttcgtatggagatcatcccagtcatttaaataatctattgcagcaacagttgtctcat cagaatggtttgcctccacagttgatgcatcagccacagcagccgcatcctagaatgcac catccagttcagcaaccattcagtcatatatcagcgatgcagtctcaactatttaacccc caccttccgccatccccacccttgatgaacaaatttgaggcaatgttcggtttgagtgat attagagatgaaaggtcaagattagctcagaaaggtagacagaatatgcgtttttctcaa catggctttgatacaggtggctacaggagtggtggtgggtgggcaccatttaggtccaag tatatgacagctgatgaaattgagggtatactgcgaatgcagcttgctgcgacacacagc aatgacccatatgtagatgattattaccaccagtattgccttgcaagaaaatctgctggg gcaaagatgacacatcatttctgtccaactcaattaagggatcttcctcctcgggcaaga gctaatactgaaccacatgcttttctccaagttgatgctcttgggagggtaccattctct tcaatacgcaggcctcggcctcttcttgaagtggagccaccaaattcatctagtccaagc aactctgaacagaaggtttctgagaagcctctagaacaggagccaatgcttgctgctagg gttacaattgaggatggactttgtctgctcctggatgtggatgacattgatcgtttttta caattcaatcagctccaagatggtggaacccagttgaggcataggcgtcaaagcttgcta gaagggctcgcagcatctcttcaattggttgatccacttgggaaaaatgaccacacagat gggcctgctctcaaagatgattttgtgtttctgaggttagtctctctacccaagggccga aagctccttgccaagtatctacagctcctttttccaggtggtgagctcatgcgaatagtc tgtatggccatcttccgccatctaaggttcttgtttggtgtccttccttctgatccaagg gctgcagaaaccacaaacaatatcgctagggtcgtttcatcatgtgttcgaggtatggac cttggtgcacttagtgcttgtctggcagcagtggtttgctcctcagagcaacccccgctt cgtcccattggaagttctgccggagatggggcttctctcgttcttaatgctgttcttgac agggcaactgaactcttaactgatcctaatgctgctagcaactacaatatgactaatcgg gcactttggcaggcctcctttgatcaattctttggccttctgactaagtattgtgtaaac aagtatgatactataatgcagtcactgctgttgcatgcccccacaaatatggctgttatc ggctcagatgcagccagagctattagtcgtgaaatgccagttgagctgctgcgtgctagt cttcctcacaccgatgatcaccagagacagttgctgttaaatttcacgcagcggtccatg cctgttggaggatctaacaatcatgatggtgcacacattaattcagagtctgttctaagt tga

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