Fragaria vesca (woodland strawberry): 101299895
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Entry
101299895 CDS
T02666
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101299895
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101299895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_EML
EIF3I
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
MIOS_WD40
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_HPS5
WD40_RFWD3
WD_LRWD1
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
101299895
NCBI-ProteinID:
XP_004306362
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Position
LG6:37364679..37368138
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AA seq
510 aa
AA seq
DB search
METTSKPRSFFQGVRSRELHGSRAPKRSYVDCLASEFSEAGAIAAEHNGPPMAISFGKTS
RNSHIVAMSDEDGYLSLFDTRRRFSASASHQENADRTKVCDWVAHQNAVFDICWIKDDTQ
IVTASGDQTVKVWDIQEKKCTAVLMGHTGSVKSLSPHPTNPDIIVSGSRDGSFALWDMRC
NSTSKNTLAELCICPTAVIKGAHLTPWAKRSRRGRAAPRSITSVLNLKDEVSIATAGAVD
SVVKFWDTRSLKTVVTQTCPQMESNEKERRFHGITSLSQDLNGVFVSASCMDNSIYLYNV
LQLEKGPMQSFSGGRIESFFVKSAISPDAAYILSGSSDGNAYIWQVNKPQEDPVILKSHD
GEVTAVDWSHFEVGKIATSSDDFTVRIWNSENRYCPSTPSSSAIRRRIMAFPGVECRRLM
NESMDMSKDGKSCRSDEGVDEINSLNPIKMPRICTPDSQKKQCMLDSDMSETFEKTPEAT
MKSPSSVLNPPSSLKRKTIRDYFVVPTLNL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggagacgacttcaaagccccggtccttcttccaaggcgtcagatccagagagctacac
ggatcccgagctccgaagcggtcctacgtggattgcctggcttcggaattctccgaggcc
ggagctattgccgccgagcacaacggacctccgatggccatttcgttcggcaagaccagt
agaaactctcacattgtggccatgtctgatgaggatggctacttgagcttgttcgacacg
cggcgcaggttctcggcgtctgcatctcaccaggaaaatgcagatagaaccaaggtttgt
gattgggttgcgcatcagaatgcggtatttgacatctgttggataaaggatgatactcaa
attgtgacagcttctggtgatcaaactgtaaaagtatgggatattcaggagaagaaatgt
actgcagttctaatggggcacactggaagtgtgaaatctttgagccctcatccaactaat
cctgatattattgtctctggttcaagagatggctcctttgctctctgggatatgagatgc
aattcaacctccaaaaatacgcttgcagagctatgtatatgccctactgctgtgatcaaa
ggggctcatcttaccccctgggcaaagcgttcaaggcgtggaagggctgctccaaggagc
atcacatcagttcttaatcttaaagatgaggtttccattgctaccgctggagctgtggac
agtgtcgtcaagttctgggacactagaagtctgaaaactgtagtcacacagacatgtcct
cagatggagtcaaatgagaaggagagaagatttcatggcataactagcttatcccaagat
ttaaatggagtgtttgtttcagcctcttgtatggacaacagcatttatctgtacaatgtg
cttcagctagaaaagggtcctatgcaatccttctctggaggtcggattgaatcctttttt
gtgaagtcggctatcagccctgatgctgcttacatactcagtggttctagtgatggaaat
gcctacatttggcaggtaaacaagcctcaagaagatccagtaatattgaaaagccatgat
ggagaagttacagcagttgactggtcccattttgaggttgggaagatagcaacttcttca
gatgattttacggttcgcatctggaactctgagaatcgttactgccctagcaccccatca
tcatctgcaattagaagaagaattatggctttccctggtgtagaatgtagaaggctgatg
aacgaatcaatggatatgtcaaaggatggaaagtcctgtcgctcggatgaaggagtagat
gaaattaactcacttaatccaattaaaatgcctagaatctgtactcctgattcacagaag
aagcaatgcatgttagattccgacatgagtgaaacatttgaaaagacccctgaagctaca
atgaagagcccctcttctgttctgaaccctccctcttctctaaaaaggaaaactatccgc
gattactttgtagtacctactctgaacttgtag
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