Fragaria vesca (woodland strawberry): 101299966
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Entry
101299966 CDS
T02666
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
101299966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101299966
Membrane trafficking [BR:
fve04131
]
Endosome - Golgi transport
Others
AP-4 complex
101299966
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT
HEAT_2
INTS1_R4
TOR1L1_N
PIK3R4-like_middle
HEAT_GCN1
HEAT_GCN1_C
PDS5
PDZ_1
NPHI_C
TPR_DNAAF5
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
101299966
NCBI-ProteinID:
XP_004300686
LinkDB
All DBs
Position
LG5:complement(28709096..28719763)
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AA seq
968 aa
AA seq
DB search
MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSKAEEERIVLHEIETLKRRLAEPD
IPKRKMKEYLIRLVYVEMLGHDASFAYIHAVKMTHDDNLVLKRTGYLAVSLFLNDDHDLI
ILIVNTIQKDLKSDNYLVVCTALNAVCKLINDETVPAVLPQVVELLAHQKEAVRKKAIMA
LHRFYQKSPSSVLHLVSNFRKRLCDNDPGVMGATLCPLFDLITIDVNTYKDLVVSFVSIL
RQVAERRLPKTYDYHQLPAPFIQIRLLKILAMLGSGDKQASEKMYTVVSDIFKKCDSTSN
IGNAVLYECICCVSAIHPNPKLLDQAAQVISRFLKSDSHNLKYMGIDALGRLIKISPEIA
EQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMISYMISINDNHYKTYIAS
RCVELAEQFAPSNQWFIQTMNKVFEHAGDLVNVKVAHNLMKLIAEGFGEDDDTADSQLRS
SAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKYSASYITGKLCDVAEAYSNDETVK
AYAVTAIKKIYAFEISAGRKVEMLPECQSLVEELSASHSTDLQQRAYELQAVIGIDAHAI
ESIMPSDASCEDVEIDKNLSFLDGYVQQAIEKGAQPYISENERTGMLNINNFRNQDQPEA
LSHSLRFEAYELPKPLVPSRVPPAAVASSTELVPVPEPYYARETHQTASLPSVSDAGSSE
LKLRLDGVQKKWGRPTYSSSASLTSTSSSHKTTNGVTQVDGVGTSNSKGRDTYDSRKPSV
EISPEKQKLASSLFGGSSRTEKRASSGNHKVSKAAEKSHVGKAAGAHSDTVVEKINREPT
PDLLDFSDLAVTSTAPSVDPFQQLEGLLDQTEATSTMNNGAAGASRTPEIMGLYADSAVS
GLSSSVANRDEFNLSSELSNAARTSQVGVSQLNKGPNPKDSLEKDALVRQMGVNPTSQNP
NLFKDLLG
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcaagaccatcgggcgggagctcgccatgggctcccagggcggcttcggc
caatccaaggagttcctcgacctcgtcaagtccatcggcgaagcccgatccaaggccgaa
gaggaacgcatcgtcctccacgagatcgaaaccctaaaacgccgcctcgccgagcctgac
atccccaaacgcaagatgaaggagtacctcatccgcctcgtctacgtagaaatgctcggc
cacgacgcctccttcgcttacatccacgccgtcaagatgactcacgacgacaatctcgtc
ctcaaacgcaccggctacctcgccgtctctctcttcctcaacgacgaccacgacctcatc
atcctcatcgtcaacaccatccagaaagacctcaaatctgataactacctcgtcgtatgc
accgcgctcaacgccgtttgtaagctcatcaacgacgagactgttcccgccgttttgcca
caggtcgtggagctgctggcgcatcagaaggaggcggtgcggaagaaggcgatcatggcg
ctgcataggttttaccagaaatcgccgtcgtcggttttgcatctggtgtcgaatttccgg
aagcggctctgtgataatgatcctggagtcatgggagccacgctgtgcccgttgtttgat
ctcattacgattgatgtgaatacttataaggatttggtggttagctttgtcagcattttg
aggcaagttgcggagcggaggttgcctaagacgtatgactaccatcagcttcctgcgcct
tttattcagatcaggttgttgaagattttggcaatgttggggagcggggataagcaagcg
agtgagaagatgtatacggtagtcagtgacatatttaagaagtgtgattccacgagtaat
ataggaaatgcggttctttacgagtgtatttgttgcgtttctgcaatacatccgaatcct
aagttgttagatcaggctgctcaagtcatctcaagatttttgaagagtgacagtcataat
ttgaaatatatgggaattgatgctcttggtcgactgatcaagatcagtccagagatagct
gagcaacaccagttggctgtcattgattgcttagaggacccagatgatactttgaagcga
aaaacatttgaactgttgtataagatgaccaagtcctccaatgtggaggtgattgttgac
cgcatgattagttacatgataagcattaatgataatcattacaaaacatatatagcatct
cgatgcgtggagcttgctgagcaatttgctccaagcaatcaatggtttatccagaccatg
aataaagtctttgaacatgctggagatttggtgaatgttaaggtggcacataacttgatg
aaattgattgctgagggatttggagaggatgatgatactgcagatagtcagttaagatca
tctgcggtggaatcatatttgcgcataattggagagccaaagcttccgtctgtatttctt
caggtcatttgttgggttttgggagaatatggaactgctgatggaaagtattctgcttca
tatatcactgggaaattatgtgatgtggctgaggcatattcaaatgatgaaactgtcaag
gcatatgctgttacagcaatcaagaaaatatatgcatttgaaatatcagctggaagaaaa
gtggaaatgctacccgagtgtcaatctttggtggaggaattatcagcttctcattctaca
gatctccagcagcgtgcatatgaattgcaagctgtcattggcatagatgctcatgccatt
gagagtattatgccatcagatgcaagttgtgaagatgttgagatcgataaaaacctttct
ttccttgatggttatgtccaacaggcaatagaaaaaggtgctcagccatatatttctgag
aatgagcgcactggaatgttaaatatcaacaattttagaaaccaagatcagcctgaagct
ctaagtcacagtcttcggtttgaggcctatgagcttcccaaaccactggtgccatcaaga
gttcctccagctgcagttgcatcctcaactgaacttgttccggtgcctgaaccatattat
gctagggagacacaccagactgcatcattgccatctgtgtcagatgcaggatcatcagaa
cttaaattacgacttgacggtgttcagaagaaatggggtaggcctacatactcgtcttct
gcatctttgacctcaacatctagttcccacaaaacgacaaacggggtaacacaggtagat
ggtgtgggtacttcgaactcaaaaggacgtgatacttatgattcaaggaagccatcagtt
gaaatttctccagaaaagcagaagttggccagttcactttttggaggttcatcaagaaca
gagaagagggcatcttcgggcaaccataaagtgtccaaggccgcagagaagtcgcacgta
gggaaggcagcaggtgcacacagtgacactgtagtggagaaaataaatcgggaacctact
ccagacttgcttgacttcagtgatttagctgttactagtactgccccatctgtagatcct
ttccagcagttggaagggcttcttgatcaaactgaagctacatcaaccatgaacaatggt
gcagcaggtgcttcaagaacacctgaaattatgggattatatgcagatagtgctgtgagt
gggctcagcagcagtgttgccaatagagatgaatttaatctttcatctgaattatcaaat
gctgcaaggacttctcaagttggggtgtcacaattgaataagggtcctaaccctaaagat
tcattggaaaaggatgcacttgtaaggcagatgggcgttaaccccacaagtcagaacccc
aacttgtttaaagatttgcttggctag
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