Fragaria vesca (woodland strawberry): 101300015
Help
Entry
101300015 CDS
T02666
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101300015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101300015
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101300015
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101300015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
101300015
NCBI-ProteinID:
XP_004290688
LinkDB
All DBs
Position
LG2:16874836..16877479
Genome browser
AA seq
328 aa
AA seq
DB search
MRGLQVSLNQTQKVRLQRALEKLESLSSKPNSNASVIVADSIPVNHEDGLLKGHGTSEVN
GEVVATVCGVVERVNKLVYVRSLRARYKPEVGDIIVGRVIEVAPKRWRVEINYSHDAVLM
LSSMNLPDGIQRRRTALDELNMRTIFEENDVICAEVRGFQYDGLHLQARSQKYGKLGRGQ
MLTVPPYLVKRRKQHFHNLDKYGIDLILGCNGFIWVGEHVEITDDMVVDQVNNSEQQSAK
SDKKILSPEEQERSYTPQETRENIVRTANAIRVLSALGFNITAEVIMDTVELSISLKQQV
PIYKMLGAEFCVLVAEKEAARRSVTKKK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagagggttgcaggtctccttgaaccaaacccagaaggttcgccttcagagagctctt
gaaaagctcgagtctttatcctcaaaacccaattccaatgcttctgttatcgttgccgat
tccatccccgttaaccacgaagacggacttctcaagggacatgggacgtctgaagttaac
ggcgaggttgttgcgacggtttgcggcgtcgtcgagagggtgaataagctggtttatgtg
cgttcattgagagctaggtataaaccagaggttggagatattattgtaggacgtgttatt
gaggttgctccgaaacgttggagagtggagataaactatagtcatgatgcagtgttgatg
ctttcatcgatgaacttacctgatggtatccagaggcgtcgaactgctctggatgaactg
aacatgcgcactatttttgaagagaacgatgtcatttgtgctgaagttcgtggttttcaa
tacgatggtttacatctccaagcaagaagtcagaagtatggaaagcttggaaggggtcag
atgctcacagtccctccttatctagtgaaaagacgcaaacaacatttccataatttggat
aagtatggaattgaccttattcttggctgcaatggattcatttgggttggtgagcatgtt
gaaattacagacgatatggttgtggatcaagtgaacaattccgaacaacagagtgccaaa
tctgataaaaaaattctaagccctgaagagcaagaaagaagctacactccccaggagaca
agagagaacatcgtcaggactgcaaacgctattcgcgtactgtctgctttaggtttcaat
attacggctgaagtgatcatggatacggtcgagttgagcatttctcttaaacaacaggtc
cccatatataaaatgcttggtgcagagttctgtgttcttgttgcagaaaaggaagctgca
aggagaagcgtgactaaaaagaaatga
DBGET
integrated database retrieval system