KEGG   Fragaria vesca (woodland strawberry): 101300110
Entry
101300110         CDS       T02666                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03030  DNA replication
fve03410  Base excision repair
fve03420  Nucleotide excision repair
fve03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101300110
   03410 Base excision repair
    101300110
   03420 Nucleotide excision repair
    101300110
   03430 Mismatch repair
    101300110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fve03032]
    101300110
   03036 Chromosome and associated proteins [BR:fve03036]
    101300110
   03400 DNA repair and recombination proteins [BR:fve03400]
    101300110
DNA replication proteins [BR:fve03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101300110
  DNA Replication Termination Factors
   ELG1-RFC complex
    101300110
Chromosome and associated proteins [BR:fve03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101300110
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101300110
  Check point factors
   HRAD17(Rad24)-RFC complex
    101300110
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_delta Rad17 Sigma54_activ_2 RuvB_N Mg_chelatase AAA_11 AAA_22 DUF815 AAA_5 Spore_III_AA ABC_tran AAA_29 AAA_2 AAA_24
Other DBs
NCBI-GeneID: 101300110
NCBI-ProteinID: XP_004289753
LinkDB
Position
LG2:complement(3110373..3117518)
AA seq 354 aa
MLWVDKYRPKTLDQAMVHQDIAQNLKKLVAERDCPHLLFYGPPGSGKKTLIIALIRQIFG
PSADKVKVENKTWKVDAGSRTIDIELTTLSSNNHFELNPSDAGFQDRYIVQEIIKEIAKN
RPFDTKGKKGYQILVLNEVDKLSREAQYSLRRTMEKYSAYCRLILCCNSSSKVTEAIRSR
CLNVRINAPTDEQIVKALEFIGKKEGLQLPSGFAARLAEKSNRNLRRAILSLETCHVQQY
PFTSNQIIPSMDWEEYVSEIASDIMKEQSPKRLYAVRQKLYELLVNCISPEIILKRLLYE
LLKKLDAELKHEVSHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKAFLIAAFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgctgtgggtggacaagtacagacccaaaaccctagaccaggcaatggtccaccaagac
atcgcccaaaacctcaagaaacttgttgcggagcgggactgcccccatttgctgttctac
gggcctcctggctccggcaagaaaaccctaatcatcgcccttattcgtcagattttcgga
cccagcgccgacaaggtaaaggtggaaaacaagacatggaaagttgatgctgggagtaga
accattgacatcgagctgactacattatcaagcaacaatcactttgaactaaaccccagt
gatgcaggctttcaggacagatacattgttcaagagatcattaaggaaattgctaaaaat
agaccctttgacacaaaaggaaaaaagggatatcaaatcttggtgttgaatgaagttgac
aaactttccagagaagcacagtattctcttcgaagaactatggagaaatatagtgcttat
tgccgcctaatactatgctgtaacagttcttcaaaggttactgaagcaatccgatcacgg
tgtctaaatgtgcgaataaatgcaccaacagacgaacagattgttaaggcactggagttc
attggaaagaaagaagggcttcaacttccttctggatttgctgcccgtctagctgaaaaa
tcaaacaggaacttaaggagagctatattgtctctagaaacttgtcatgttcaacagtat
ccctttacaagcaaccaaataattccttcgatggattgggaggaatatgtttcagaaata
gcctctgatataatgaaggagcagagtccgaaaaggctttatgcggtgcgccaaaagttg
tatgagcttcttgttaactgtatctcccctgagatcattcttaagaggctgctttatgag
ttattgaagaaattggatgcagaattgaagcatgaggtcagccattgggcagcatattat
gaacataggatgcgtcttgggcagaaagccatatttcacctcgaagcgttcgtggccaag
ttcatgagtatttacaaggctttcctcattgcagcgtttggctaa

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