Fragaria vesca (woodland strawberry): 101300110
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Entry
101300110 CDS
T02666
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03030
DNA replication
fve03410
Base excision repair
fve03420
Nucleotide excision repair
fve03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101300110
03410 Base excision repair
101300110
03420 Nucleotide excision repair
101300110
03430 Mismatch repair
101300110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fve03032
]
101300110
03036 Chromosome and associated proteins [BR:
fve03036
]
101300110
03400 DNA repair and recombination proteins [BR:
fve03400
]
101300110
DNA replication proteins [BR:
fve03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101300110
DNA Replication Termination Factors
ELG1-RFC complex
101300110
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101300110
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101300110
Check point factors
HRAD17(Rad24)-RFC complex
101300110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Rad17
Sigma54_activ_2
RuvB_N
Mg_chelatase
AAA_11
AAA_22
DUF815
AAA_5
Spore_III_AA
ABC_tran
AAA_29
AAA_2
AAA_24
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
101300110
NCBI-ProteinID:
XP_004289753
LinkDB
All DBs
Position
LG2:complement(3110373..3117518)
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDQAMVHQDIAQNLKKLVAERDCPHLLFYGPPGSGKKTLIIALIRQIFG
PSADKVKVENKTWKVDAGSRTIDIELTTLSSNNHFELNPSDAGFQDRYIVQEIIKEIAKN
RPFDTKGKKGYQILVLNEVDKLSREAQYSLRRTMEKYSAYCRLILCCNSSSKVTEAIRSR
CLNVRINAPTDEQIVKALEFIGKKEGLQLPSGFAARLAEKSNRNLRRAILSLETCHVQQY
PFTSNQIIPSMDWEEYVSEIASDIMKEQSPKRLYAVRQKLYELLVNCISPEIILKRLLYE
LLKKLDAELKHEVSHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKAFLIAAFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggtggacaagtacagacccaaaaccctagaccaggcaatggtccaccaagac
atcgcccaaaacctcaagaaacttgttgcggagcgggactgcccccatttgctgttctac
gggcctcctggctccggcaagaaaaccctaatcatcgcccttattcgtcagattttcgga
cccagcgccgacaaggtaaaggtggaaaacaagacatggaaagttgatgctgggagtaga
accattgacatcgagctgactacattatcaagcaacaatcactttgaactaaaccccagt
gatgcaggctttcaggacagatacattgttcaagagatcattaaggaaattgctaaaaat
agaccctttgacacaaaaggaaaaaagggatatcaaatcttggtgttgaatgaagttgac
aaactttccagagaagcacagtattctcttcgaagaactatggagaaatatagtgcttat
tgccgcctaatactatgctgtaacagttcttcaaaggttactgaagcaatccgatcacgg
tgtctaaatgtgcgaataaatgcaccaacagacgaacagattgttaaggcactggagttc
attggaaagaaagaagggcttcaacttccttctggatttgctgcccgtctagctgaaaaa
tcaaacaggaacttaaggagagctatattgtctctagaaacttgtcatgttcaacagtat
ccctttacaagcaaccaaataattccttcgatggattgggaggaatatgtttcagaaata
gcctctgatataatgaaggagcagagtccgaaaaggctttatgcggtgcgccaaaagttg
tatgagcttcttgttaactgtatctcccctgagatcattcttaagaggctgctttatgag
ttattgaagaaattggatgcagaattgaagcatgaggtcagccattgggcagcatattat
gaacataggatgcgtcttgggcagaaagccatatttcacctcgaagcgttcgtggccaag
ttcatgagtatttacaaggctttcctcattgcagcgtttggctaa
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