Fragaria vesca (woodland strawberry): 101300147
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Entry
101300147 CDS
T02666
Name
(RefSeq) probable phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101300147
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fve01007
]
101300147
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fve03016
]
101300147
Enzymes [BR:
fve01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
101300147
Amino acid related enzymes [BR:
fve01007
]
Aminoacyl-tRNA synthetase
Class II (U)
101300147
Transfer RNA biogenesis [BR:
fve03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101300147
Prokaryotic type
101300147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
101300147
NCBI-ProteinID:
XP_011464262
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All DBs
Position
LG5:complement(7172564..7177399)
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AA seq
605 aa
AA seq
DB search
MPTVSVGRDRLFAALGKSYTEEELKKKEVSEKAEREFEDECFRFGIELDDVTTEKAIVRK
EKHLDEEEADEDEEVIYKIDIPANRYDLLCLEGLSQALRIFEKKEEVPQYKLANISKETM
MKMHVKPETSLIRPHVVCAVLRGITFTEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLD
TIQAPFSYEALPPSSISFVPLKQAKNFRADELMEFYKSDLKLKKFLHIIENSKVFPVIYD
NNRTVLSLPPIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTIVTAFSSYCERKFEIE
PVEVIYPDGKSYVYPDLSVYNMDVSLSYINRKIGLSLGADEVIDLLNKMQLEAQQSSGNN
QDIITVLVPPTRSDILHPCDVMEDVAIAYGYNNIPRTRPASVKPLVLNELSDMLRSEIAM
NGYTEVQNFILCSWKENFDLLRRIDDKSKAVVVGNPRSSDFELVRTTLMPGILKSVGHNK
DHPKPIKVFEVGDVTILDEKKDVGASNRRQLAALYCGASSGFELIHGLVDRIMEVLGAAF
VPGGDNAGYNLQHAKEPEFLSGLQASIYYKGKQIGNFGIVHPEVLKNFDIPDPCSYVELN
IESFL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggtcagcgtaggacgggatcgtctgttcgccgccctaggcaaaagttacacg
gaggaagagctgaagaagaaggaagtgagcgagaaagctgagagagagtttgaagatgag
tgcttccgtttcggaatcgagctagacgacgtcaccactgagaaagcgattgtaaggaaa
gagaagcatctggatgaggaagaagccgacgaagatgaagaagttatatacaaaattgac
attcctgctaatagatacgatttgctttgccttgaagggctgtcacaagctctccgtatc
ttcgaaaagaaggaggaggttcctcaatataagttggcaaatattagcaaggagactatg
atgaaaatgcatgtgaaaccagagacatctttgattcgacctcatgtcgtttgtgctgtg
ttaagaggaataacattcactgaagcaagctataacagctttattgacctccaagacaag
ctccatcaaaatatctgccggcggcgaaccctagttgccattgggactcatgatttggac
acaatacaagctcctttctcatatgaggctctgccaccttcaagcataagttttgtgcca
ctgaaacaggcgaagaacttcagagctgatgagctcatggaattttacaaatcagatttg
aagctgaagaagttcctacacataatagagaactccaaggttttccctgttatatatgat
aacaacagaactgttttgtcgttgcctcccattattaatggtgcccattcagcgattact
ttgaagacaaagaatgtcttcatagagtgtacagcgactgatttgacaaaggcaaagatt
gtcctcaacacaatagtgacagcattttcatcatattgtgaaagaaagtttgagattgaa
cctgttgaagtgatatatcctgatggaaaatcatatgtatatcctgatttatcagtctac
aatatggatgtttcgttgtcatacattaatcgcaaaattggactctctttgggggccgat
gaggtcattgatttgttgaataagatgcaattagaagcacagcagtcatcaggcaataac
caagacattatcactgtacttgtacctccaacaagaagtgacatccttcacccttgtgat
gtcatggaggatgttgcaattgcatatggttataacaatataccacgaacaaggcctgct
tctgtgaagccacttgtcttgaatgagcttagcgatatgctccgatctgagattgccatg
aacgggtatacggaggtacagaatttcattctgtgctcgtggaaagaaaattttgacttg
ttacgtcgtatagatgacaaatcaaaagctgtggttgttggaaatcctcgctcatctgat
tttgagcttgtacggaccactctgatgcctggcatattgaaatccgtgggtcacaacaaa
gatcacccaaagcccataaaggtttttgaagtgggtgatgtgactatattggatgagaaa
aaagatgttggtgcatcaaaccggcgccagttagcagcgttatactgtggggctagctct
gggtttgagttgattcatgggctggtggatagaatcatggaagtactcggggctgctttt
gttcctggtggcgacaatgcaggctataatttacagcatgcaaaggagcctgagtttctg
tctggcttacaagcaagcatctattataaagggaagcaaattggaaattttggtattgtg
caccctgaggtcttgaagaacttcgatattcctgatccgtgctcgtatgtggaattgaac
attgagagtttcttgtaa
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