Fragaria vesca (woodland strawberry): 101300161
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Entry
101300161 CDS
T02666
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 7
KO
K05391
cyclic nucleotide gated channel, plant
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101300161
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fve04040
]
101300161
Ion channels [BR:
fve04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101300161
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
101300161
NCBI-ProteinID:
XP_004303237
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Position
LG6:16740350..16744185
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AA seq
739 aa
AA seq
DB search
MYKSQYFGGQKEKFVRLDDLDTMSISSDTGKVKKCGFNIEGLAYTDRRKRKSKSVKFGFP
RGSDGIMTVGRSIKTGVTRAVFPEDLKVSDKRIFDPQDKSLLFWNRLFVISCIFAIAIDP
FFFYLPIFNKEQECLSIDKSLAVTSITVRTLIDVFYLIRMAFQFRTAYIAPSSRVFGRGE
LVIDSSEIAQRYLHRYFFVDLLSVLPAPQIVVFVYLHGNGAAVLTTKKALLYIVWFQLLP
RFARLLALNSDLKKSAGSFAETAWAGAAYYMLWFMLAAQVTGAAWYLLSVERYGSCWWDK
CAENGGQCKVEFLYCGSESMPGYDEWSKVKEDVVKKGCSAEGEDTEFDYGIFKGAVESDI
ISSTNFGEKFLYCLWFGLKSLSTLGQGLETTSYPMENIFSIGVGTFGLILFALLIGNIQT
YLQSLTIRLEEMRIKRRDSEQWMHHRWLPQELRERVRRYDQYKWLETRGVDEESIVRTLP
KDLRRDIKRHLCLNLVRRVPLFTNMDERLLDAICERLKPSLCTENTFIVREGDPVGEMLF
IIRGRLESVTTDGGRTGFYNRGLLQEGDFCGEELLTWALDPKAGSNLPSSTRTVKAITEV
EAFALEAEELKFVSTQFRHLHSRQVQYTFRFYSQQWRTWAACFIQAAWRHYRRRVALEKQ
REEEGFGYSDGDDDNDDDDGGGGGDSKGGSGKHGLGAAILASRFAAKTLRGHRLRSSGRR
ELLKLQKPPEPDFSAYDDK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagtcgcagtattttggaggtcagaaggagaaatttgtgaggttggatgatttg
gatacaatgtcaataagttcagataccgggaaagtgaagaaatgtggatttaatatagag
ggtttggcttatactgatcgtcgaaaaagaaaatcaaagtcagttaagtttggatttccg
aggggatcagatggaataatgacagttggtagatcaataaaaactggtgtcacccgtgca
gtgtttccagaagatcttaaagtttcggataaaaggatatttgatccacaggacaagtcg
cttctgttctggaacaggctttttgtcatatcatgtatctttgcaatagccattgatcct
ttcttcttttatctccctatattcaacaaggaacaggaatgcctctctatcgataaaagt
ttagcagtcacaagtataacggtgcgaactttaatagatgttttctaccttattcgcatg
gcttttcagtttcgtacagcttatattgcaccatcttctcgggtgtttggaagaggtgaa
ctggtgatagattcttcagagatagcacagcgatatctacatcgttacttctttgttgat
cttttgtctgtgctacccgcaccacagattgttgtttttgtatatttgcatggaaatggt
gcggcggtactgactacgaaaaaggcattgctatatattgtctggtttcagttactgcca
agatttgcccgcttattagctttaaactcagaccttaagaagagcgcgggttcttttgcc
gaaactgcttgggccggggctgcatactatatgctttggtttatgcttgctgctcaagtc
actggggctgcctggtacttgttatctgtagaacgctatggttcatgctggtgggataag
tgtgcagaaaatggtggtcaatgtaaagtagaatttttgtactgtggcagtgagagtatg
ccgggatacgatgagtggagcaaagtcaaagaggatgttgtaaagaagggctgcagcgct
gaaggtgaagacaccgaatttgattatggcatcttcaaaggtgctgtagaatctgatatt
atttcatccaccaactttggagaaaaatttttgtattgcttgtggtttggattgaaaagt
ttaagtacgcttggccaggggcttgaaaccacttcgtatccaatggagaatatattttcc
ataggggtaggcacttttggcctcatcctctttgcccttctgatcggaaatatacagacc
tatcttcagtctctcacgattcgtcttgaggagatgagaataaaacggcgtgactctgag
cagtggatgcaccatcgctggcttccgcaggaacttagagaaagggttcgccgctacgat
caatataaatggttggagactcgaggtgtagatgaggagagcattgtcaggactctccca
aaagatctcaggagggacattaaacggcatctctgcttgaacttggtcagacgggtgcct
cttttcaccaatatggatgagcggttgcttgatgccatttgtgagcgtctgaaaccaagt
ttatgcacagagaatacttttatagtccgggaaggagatcctgttggtgagatgttattc
atcatccgaggtcgcctagaaagtgtgaccacagatggtggcaggactggattttacaac
agaggtttgctccaggaaggtgacttttgtggagaagagctcctaacatgggcactggac
ccgaaagccggctctaacttaccatcatctactcgaacagtgaaggctataactgaggtt
gaggcatttgctttggaagcagaggagttgaaatttgtttccactcagtttaggcacctt
catagcagacaggtgcagtacaccttccggttctactcacagcaatggaggacttgggca
gcctgctttatccaagctgcttggcgccactacaggagaagagtggcgttggaaaaacaa
agagaggaggaaggattcggatacagtgacggagatgatgataatgatgacgatgatggt
ggtggtggcggtgattctaaaggcggttctggtaaacatgggcttggtgccgcaatcctt
gcatcccggtttgcagcaaaaactcttcgtggtcataggcttcgcagttcaggcaggagg
gagctactgaagctgcagaagccccctgagccagatttctcggcttatgatgataagtaa
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