Fragaria vesca (woodland strawberry): 101300270
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Entry
101300270 CDS
T02666
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101300270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fve02000
]
101300270
Transporters [BR:
fve02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
101300270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA_25
AAA_28
AAA
nSTAND3
RsgA_GTPase
ABC_ATPase
DnaB_C
Motif
Other DBs
NCBI-GeneID:
101300270
NCBI-ProteinID:
XP_011466722
LinkDB
All DBs
Position
LG6:complement(11783857..11793559)
Genome browser
AA seq
1422 aa
AA seq
DB search
MESGNIQLGSSSIRRNHGRMEAFSSSARGDNDEEALKWAALEKLPTYNRLRKGILTSASG
KANEIDIPNLGFQQRKDLIERLLKNTEDGNEKFLLKLKNRIDRVGIDLPTIEVRFEHLNI
EAEAYLGSRALPTLLNWSTNIIEGLLTYIGIISSRKTNFSILQNVSGIIKPSRMTLLLGP
PSSGKTTLLLALAGKLDPDLKLSGRVTYNGHGMNEFVPQKTAAYISQYDVHIGEMTVRET
LAFSARCQGVGTRYDMLAELARREKAANIKPDPDIDVFMKATTIEGQEVNVVTDYILKIL
GLEACADTIVGDDMLRGISGGQRKRVTTGEMLVGPTNALFMDEISTGLDSSTTFQIVNSI
KQNIHILNGTAVISLLQPAPETYELFDDIILLSDGQIVYQGPRENVLEFFETMGFKCPER
KGIADFLQEVTSRKDQEQYWERKEDPYSFVTVKEFAEAFQSFHVGQRLGEELSVPFDKRK
NHPAALTTKKYSVKKGELLKACVSREILLMKRNSFVYYFKLIQITFLALMFMTTFLRTKM
HHSSIDDAIVYAGALFFANIVIMFNGMAELSMTLIKLPVFYKQRDFFFYPSWAYALPTWI
LKVPISLVEVAIWVFMTYYVTGFDPNVGRLFKQYLLFLLVNQMASALFRAIAALCREMVV
AYSLGSFANLIFFTLCGFILARADKINKLWKWGYWSSPLMYSQNALIVNELLGKNWRHVL
PNSTVSIGVAALKYRSFFTNAYWYWIGVCALIGYVLLFNLGYVLALSYLHPLGKTQAFKS
EDSVRIAEESRSSQPTIPESIYTVSPDAINVRKRGMVLPFEPHSITFDEITYSVDMPKEM
KMEGVVEEKLVLLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYFDGDIKISG
YPKKQETFARISGYCEQTDIHSPQLTVYESIVYSAWLRLSPEVKSETKRVFIEEVMELVE
LNPLRQSFVGLPGINGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR
NTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQEIYVGPLGRHSCNLIKYFEEIEGVS
KIKDGYNPATWMLDVSTSAQELALGIEFAYVYKNSELYRRNKQLITEYSTPSPSSKELFF
PTRYAQSFLIQSMACLWKQHWSYWRNPSYISVRILFTLITALMFGTMFWNLGSKTKTKQD
LFNAMGCMYTAVLFIGVKNSMSVQPVVAVERTVFYREKAAGMYTSLAYAFAQVTIELPYL
LVQSVVYGVTTYLMIGFERKFVKFFWYIFYMYFTLAYCTFYGMMTVAITPNYQIASVVSS
LFYGVWNLFSGFLIPRTRIPIWWRWYYWACPIAWTLYGLVASQFGDLDDMLDNGETVEQF
LRHFFGFKHDFVGVVAVALVGFTFLFAFIFAFSIRVLNFQKR
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggtaatatccaattaggcagttcgtcaatcaggaggaaccatggtcgtatg
gaagctttttcgagttctgcgcgtggagacaacgatgaagaagctctcaaatgggcagcc
ctagagaagcttcctacttataatcgtctgaggaaaggtatactcacctcagcaagtgga
aaagctaatgaaattgatataccaaatcttgggtttcaacagagaaaggacttgattgag
agattgctaaaaaacactgaagatggcaacgaaaagttcttgttgaagctcaagaatcgt
attgatagagttggaatcgatcttcccacaattgaagttcgatttgagcatctaaacata
gaagcagaagcttatctaggcagccgagctttgcctactctcctaaactggagtaccaac
ataatcgagggattgttgacctatatcggtataatttcaagtagaaagacgaacttctct
atccttcagaatgttagtggaattataaagcctagcagaatgacattactattgggtcct
ccaagttcaggcaagaccacgctgttattggctttggctggaaagcttgatccagatcta
aagttgtcgggaagggtgacttataatggccatgggatgaatgaatttgtaccccaaaaa
actgctgcatacataagtcaatatgatgtgcatattggagaaatgactgtaagggagaca
ttggccttctctgcaagatgccaaggggttggaacacgttatgatatgctagctgagcta
gccagaagagagaaagcagctaatataaagcctgatcctgacattgatgtcttcatgaag
gcaacaacaatagaaggtcaggaagtgaacgtagtgacagattacattttgaagattttg
ggattggaagcgtgtgctgatacgatagtaggtgatgacatgttaagaggtatctctggt
ggacagaggaagcgagttacaacaggtgagatgcttgttggaccaacaaatgctttgttc
atggatgagatatctactggtttggacagctcgacgacatttcaaattgtgaactcaata
aagcaaaacattcacattcttaatggaactgcagtcatctcactccttcagccagcaccg
gagacttacgagctttttgatgacattatccttctctctgatggacagattgtgtaccag
ggtcctcgtgagaatgtgcttgagtttttcgaaactatgggatttaaatgtcctgagaga
aaaggcatcgctgacttcctacaagaggtgacatcgaggaaagatcaagagcaatattgg
gaaaggaaagaggatccctatagttttgttacagttaaggaatttgccgaggcatttcaa
tcattccatgtgggacaaagacttggggaggaactttcagttccatttgacaaaagaaaa
aaccacccggctgctttaacaaccaaaaaatatagtgtgaaaaagggagaacttctgaaa
gcttgcgtctcaagggaaattttgctcatgaagaggaattcctttgtgtattacttcaag
ctaatccaaattacatttctggcactgatgttcatgacaacgtttctacgaaccaagatg
caccacagctcaatagatgatgcaatagtttatgcgggtgctttgttctttgctaatatc
gtaatcatgtttaatgggatggcagagctttcgatgacccttataaagcttcctgttttt
tacaagcaaagggattttttcttctacccttcatgggcatatgctcttccaacatggatt
ctcaaagtacctatatcacttgttgaagttgcaatttgggtgtttatgacctactacgta
actggatttgatccaaatgttggacggttatttaagcaatatcttctgttcttgctcgtt
aaccagatggcttctgctttattccgcgctattgcagcattgtgtagagagatggttgtt
gcttacagtttggggtcatttgcaaatctcatatttttcacattatgtggcttcatactc
gctagagcagacaagattaacaagttgtggaaatggggttactggagttcacctctgatg
tacagtcagaatgcattaatagttaatgagttacttgggaagaattggagacatgtactg
ccaaactcaacggtgtccataggagttgcagctttaaagtatcgaagcttctttacaaac
gcatattggtattggataggagtttgtgcactgatcggatatgtgttgctattcaacctt
ggttatgttctagctctctcctacctacacccacttggcaaaactcaggcttttaaatca
gaagattctgtgaggatagcagaggaaagtaggtctagtcaaccaaccataccagagagc
atttacacagtttcaccagatgctattaatgtaaggaaacgaggaatggttcttcctttt
gaaccacattccataacctttgatgaaatcacatactcagttgacatgccaaaggaaatg
aagatggaaggtgttgtagaggaaaagttagttcttctgaagggtgttagcggttctttt
aggccaggtgttttaacagctcttatgggtgtaagtggtgctggtaaaacaactctcatg
gatgtattggctggtagaaaaacaagtggatattttgatggcgacatcaaaatttctggg
tacccaaagaagcaagaaacatttgctcggatttctgggtattgtgagcaaactgacatt
cactcccctcaacttactgtctacgagtcaatagtgtactcagcatggcttcgtttatca
cctgaagtgaaatctgaaaccaaaagggtgttcattgaggaagtgatggaacttgtggaa
cttaatccattgaggcaatcatttgttgggttgccaggtatcaatggtctttcaactgag
cagcgcaagaggctgactatagcagttgagctagtagcaaatccctctataatattcatg
gatgaaccgacttcggggttagatgcaagagctgctgcaatcgtcatgagaacagttaga
aacacagtggatactggtagaacggttgtgtgtaccattcatcagccaagcatcgacatt
tttgaagcttttgatgagctgctcttgctgaagcggggaggacaagaaatttatgtgggt
ccattaggtcgccattcttgcaatctaatcaaatattttgaggaaattgaaggagtcagt
aaaataaaagatggttataacccagcaacatggatgttggacgtttccacttcagcacaa
gaattagctttggggattgagttcgcttatgtttacaaaaattcagaactatacaggaga
aacaagcaactcattacagaatacagcacgccttctccttcttcaaaggaactctttttc
cctactcgatacgcacaatcatttctcatccaatctatggcttgcttgtggaaacaacat
tggtcttattggcgtaacccatcgtacatctcagtcagaattctcttcacattgatcaca
gcattgatgtttgggacaatgttctggaatcttggctccaaaacgaaaacaaaacaagat
ttgtttaacgcgatgggatgtatgtacactgctgttctctttatcggggtcaaaaattca
atgtcagtccaacctgtagttgctgttgaaagaactgtcttttacagagagaaagcggca
gggatgtatacatcattagcttatgcatttgcacaggttacaattgagctcccatatctt
ttggtacaaagtgtggtttatggagtcacaacttatctcatgattggatttgagagaaag
tttgttaaattcttttggtacatattctacatgtatttcacattggcatactgtacattt
tatggcatgatgactgtggcgattactccgaactatcaaatcgcgtctgttgtgtcctct
ttgttctatggagtgtggaatctcttttctggttttcttattccacgaacgagaattcca
atatggtggagatggtactactgggcctgtccaatagcttggacattgtatggattggtt
gcatcacagtttggagatctagatgatatgctcgacaatggtgaaacagtggaacagttt
ttgagacatttttttggtttcaaacatgattttgtgggagttgttgcagtagcgcttgtt
gggtttaccttcctgtttgcattcatctttgcgttttctataagagtgcttaacttccaa
aagcgctaa
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