Fragaria vesca (woodland strawberry): 101300279
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Entry
101300279 CDS
T02666
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101300279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fve03009
]
101300279
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101300279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
DUF5727
Motif
Other DBs
NCBI-GeneID:
101300279
NCBI-ProteinID:
XP_004287895
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All DBs
Position
LG1:9373266..9380892
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AA seq
1049 aa
AA seq
DB search
METDNSVDLKVEELLKEVQLEYSHALTKFVDDAVSSIKDAIGQIPEDLKVTADLAPGFVR
DIGADKAEFEFKKPKSLKIGGSYAIGFLVKPEFNVDLFVQLPKECFHEKDYLNYRYHAKR
CLYLCVIKKYLTSSALVGKVEWSTFQNEVRKPVLIVYPVKKLVALPGFFVRIIPTAPSLF
SIPKLNLQRNNVRAVSKGGIPQATPKYNSSILEDMFIEDTEEIVKQTFLGSKELREGLIL
LKVWARRRTPIYAHDCLNGFLISVILAYLVDRNHVNKSMKAMQIFRVTMKFIATSDLWKH
GLYFIPKGQKAISKEERLPFKESFPIVICTPSRTFNLAFRITRVGFLELQNESTMTLACI
EKCRDSGFEEVFMTKIDYPVKYDHVIRLNLKGKSSVYVSGFCLDDECWRVYEQKVYNVLS
HGLSDRVKTVHVTWKSMLSESALQNGLSTLNAEPLLIGISVTSLDKAFRIVDIGPDADNK
EEALKFRQFWGDKAELRRFKDGKIAESTVWETEQWKRHIVIKKISEHVLLRHLSLSKENI
LHIVDQLDFSLLYGAEDPISSTASLIGAFEILSKRLRLIEDIPLKVSTVQALDSAFRFSS
VFPPEPHPLANEKGSFVKLNKFPPSCIRPLEVMIQLEGSGNWPMDDVAIEKTKSAFLLKI
GESLQNSWGMTCTATEDDVDVFVSGYAFRLKIWHERGLTLMRRETGNEHVNKVSNVDKEL
YFRSQHSSMINGLQTCYPAYGPVVRLAKRWAASHLFSACLEEEAVELLVAYIFLKPLPFN
APCSRITGFLRFLRLLSDYDWTFSALVVDINNDLTPNDEKEIRENFMFSRKGYEENPQNV
NSALFLATAYDKASEAWTRFSPNSVELKRLVAYAGSSANLLTKLILEDQSDSYRWECLFR
TPLNNYDAVILLHREKLPYPQRLLFPSELHQGVHVARGNASKSFHPFLLPGDFKGSLEDL
RNKVLVNFDPLRCFIGDLEKEYSNAFKLWYDSLGGDAVGITWGGCSSKKRGREEADEEVK
DPIDLLKDVGKVGTGFVRGIYLLKAPRRS
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgataactcagtggacctgaaggtggaggagctcttgaaagaggtccagctt
gaatattcacatgcgctcaccaagttcgtagacgacgccgtttcgtcaatcaaagacgcc
atcggtcaaattccagaagacctcaaggttacggcggatttagctccgggattcgtcaga
gacattggtgcagacaaagctgaattcgagttcaagaagccgaaatctctgaagattggc
ggcagttatgctatagggttccttgtgaagccagagttcaatgtggatcttttcgttcag
ttgcccaaggagtgttttcatgagaaagactatttgaattaccggtaccatgctaaaagg
tgcctgtacctttgtgtgattaagaagtacttgacgtcgtcagccttagttggtaaggta
gagtggtccaccttccagaatgaagttcggaagcccgtgctgattgtgtatccagtcaag
aaacttgttgcactccctgggttttttgtaagaataatacctacagcaccatcccttttt
agcattccgaaattgaacttgcagcggaataatgttcgtgctgtgagtaaagggggcatt
cctcaggctactcccaagtacaatagtagcattttggaagacatgtttatagaagatacc
gaagaaattgtcaagcaaacttttctaggatccaaggaattacgagagggattaattttg
ctgaaggtctgggctcgccgtaggacgccaatatatgctcatgattgcctgaatgggttt
ctaatctctgtcatattggcatatcttgtggataggaaccatgtcaataaatcaatgaag
gcaatgcaaatatttcgtgttacaatgaaattcattgctacttcagatttgtggaaacat
ggcctctacttcataccaaagggccaaaaagccatttcgaaagaggagaggctgcctttt
aaagaatcatttccgattgttatatgtactccatctaggacctttaatttagccttccgg
ataacaagggttggatttcttgagctccaaaatgaatctacaatgacactggcatgtata
gagaaatgcagagatagtggatttgaggaagtttttatgaccaagattgactatcctgtt
aaatatgaccatgtgataaggttgaacttaaaggggaagagttcggtttatgtatcggga
ttttgcttggatgatgaatgttggagggtgtacgagcagaaggtttataatgtattaagt
catgggttgagtgaccgagtgaagactgtacatgtgacctggaaaagcatgttatcagaa
tccgctctacaaaatggattgtcgacactcaatgcggagccattgctaattggaatttca
gtaacctctttagataaagctttcagaattgttgatattggtcctgatgctgataataag
gaggaggctctcaaattccgccagttctggggggataaggctgagcttaggagattcaaa
gatggaaaaatagcggaaagcacagtttgggaaactgagcaatggaaaagacacatcgtt
ataaaaaagatttctgagcatgtgcttctccgacatctttcactatcgaaagagaatatc
ttgcatatcgtggatcaactagatttctctttgctatatggtgctgaagatcctatatct
tctaccgcgagtttgattggggcatttgaaattctatcgaagcgcttgcgccttattgaa
gacatacctctgaaagtttctacggtgcaggccctagattcggctttcaggttttcatct
gtcttcccacctgaacctcatccgctagctaatgaaaagggttctttcgtaaaactaaat
aagttccctccttcatgcatccggccgctggaagttatgattcagttggaaggttctgga
aactggcctatggatgatgtagcaattgagaaaaccaaatcagcattccttcttaaaatc
ggagagagtcttcagaatagttgggggatgacatgtacagccacggaggatgatgtggat
gtttttgtctctggatatgcctttcgccttaaaatttggcatgagagaggcctaactttg
atgagacgagaaactgggaatgagcatgtaaataaggtttctaatgtggacaaggaacta
tacttccgcagtcaacattccagcatgatcaatggattacagacttgttacccagcatat
gggccagttgttaggcttgcaaaacgatgggctgcttcacatctattttcggcttgcttg
gaagaggaggcagttgagctattggtggcatatatatttttgaagcctttaccatttaat
gctccatgctcacggatcactggatttttaaggttcttgcgtttactatcagactatgac
tggaccttctctgcattagttgttgacataaataatgatttgacgccaaatgatgagaaa
gagataagagaaaactttatgtttagtagaaaaggctatgaagaaaatcctcaaaatgta
aactcagcactgttcttagctacagcatacgacaaggcatctgaggcctggaccagattt
tcaccaaattcagtggagctgaaaaggttggtggcctatgctggaagcagtgcaaacttg
ttgaccaaactcatattggaggaccagagtgattcttatagatgggagtgcctttttcga
actcctttgaacaattacgacgctgtgattcttcttcatagagaaaaattaccttatccc
caacgccttctctttccatccgaattgcatcaaggggtgcatgtggcacgtgggaatgca
agcaagagtttccacccctttcttttgcctggagattttaaaggaagcttagaggatcta
agaaacaaagtattggtaaactttgatccgctgaggtgttttattggggatctagagaaa
gagtactccaacgctttcaagctatggtatgattctctcggtggtgatgctgttggcata
acatggggaggatgcagttcaaagaaacgggggcgggaagaagcagatgaggaagtaaaa
gatccaattgatttgttaaaagatgttggtaaagtcggaacagggttcgtgaggggcatt
tatcttctcaaagccccaaggcggtcatag
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