Fragaria vesca (woodland strawberry): 101300894
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Entry
101300894 CDS
T02666
Name
(RefSeq) phytochrome E-like
KO
K12123
phytochrome E
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
101300894
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Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
PAS_4
HATPase_c
HisKA
PAS_9
PAS_3
Motif
Other DBs
NCBI-GeneID:
101300894
NCBI-ProteinID:
XP_004295419
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All DBs
Position
LG3:complement(4431875..4435833)
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AA seq
1162 aa
AA seq
DB search
MTEIEAASTVMKNNKCPNFPSLEAIISYSMEPEKATVTSSSSAASNMRAKNTTTTTTTIA
ANNDQTIVHCNADAGLLSEFEQSTVSGKSFNYTRSTINAPHSVPEERITAYFSRIQRGAL
VQSFGCMLAVDEATFKVICYSENCFDLLGLNVSSSTSKQVKTLIGVDARALFIPSSGDSL
ARASTARELSLLNPVWVYSRTTQKPFYAILHRIDVGIVIDLEPAKSRDPALSLAGAVQSQ
KLAVRAISKLQAIPGGDIGALCDTVVENVQKLTGYDRVMVYKFHEDDHGEVVSEIRRADL
ESYLGLHYPATDIPQAARFLFKQNRVRIICDCNADPVNLVHSEELKQPLLLVNSTLRAPH
GCHRQYMANMGSTASLVLAVTVNSAESIKLWGLVVCHHTSPRYVPFPLRYACELLIQAFG
LQLNMEFQLALQLAEKKILKTQTLLCDMLLRDAPSGIVTQSPSIMDIVKCDGAALYYNGT
CWLMGVTPTESQVKSIVEWLLKNHGDSTGLSTDGLAEAGYPDAASLGNAVCGLATARISS
NDFLFWFRSQTANEVLWGGAEHDPHDKDDGERMHPRTSFKAFLEVAKSRSLPWEVSEINA
IHSIQLIMRDSFQEMEETGLKAIKHASPSGTAKQSQGMDGISSVACEMVKLIETAQVPIF
GVDSEGLINGWNAKIAELTGLVDSEAMGKSLVNDIVHEDSRGDVEGILSRALQGDEDKNI
ELKLRNFGPPQQNSDVYIVANSCTSRNRANNVVGVCFVGQDITCEKLVTDKFVRLQGDYK
AIIQSLNPLIPPIFASDENACCSEWNAAMGKLTGVTRDEAIGKMLPGEIFGDYCRLKGKD
SMTKFMIVLYQGISGQEIEKFPFGFFDREGKYVEVLLTANKRTDANENIIGCFCFLQIFQ
PDLQSAMEGLRQEDSNSSSKLKELIYMRQEMKNPLNGIRFTHKLLENTIISSYQKQFLDT
SDACERQIMAILENMDTRSIEQGSVVLNMEEFLLGSVLDAIVSQSMISLRQRNVQFLHEV
PNEIKSLYLHGDRIKLQLVLSDFLLNVVLHASPNGWVEIRISPGLKLIKDGNSYIRLQFR
MTLSGQGLPTALIEDMLDDGNRWTTQEGLGLNLSRKLLSRMNGRVQYVREHDKCYFLIDI
ELGTRKERQMMLLTQADKSASP
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgacagagatagaagcagcaagtacagtgatgaaaaacaataaatgtccgaactttcca
agcttagaagccatcatttcttactctatggaacctgagaaagccaccgttacatcctca
tcctccgccgcaagcaacatgagggccaagaacaccaccaccactaccaccaccatcgcc
gccaacaacgaccaaacaatcgttcactgcaatgcagacgctggccttttaagtgagttt
gaacagtccactgtgtctggtaagtccttcaactacacgagatcaaccatcaatgcaccg
cactctgtccctgaagagcgcataaccgcttacttctccagaatccaaagaggcgctctt
gtgcagtcttttggctgcatgcttgcagttgatgaagcaacgttcaaggtcatttgctac
agtgagaactgctttgaccttttgggtttgaatgttagttcttccacgtcgaaacaagta
aagactctgattggagttgatgctagagccctgtttataccctcatccggggattcactg
gccagagcgtctacggccagagagttgtcattgttgaacccagtttgggtgtattccagg
actacacagaagccattttatgctatattgcataggattgatgttgggattgtgattgat
ttggagcctgctaagtcccgtgatcctgcattgtcccttgcaggggctgtgcagtcccag
aagcttgcggtgcgggcaatttcgaagctgcaggctattcctggaggagatattggagct
ttgtgtgacactgtggtggagaatgttcagaagcttactggatatgatagagtcatggtg
tacaagttccatgaagatgatcacggggaagttgtgtctgagatcagaagggcggatttg
gagtcctatttggggttgcattatcctgcaacggatatccctcaagcggctcggttcttg
ttcaagcaaaatcgggtgcggataatttgtgattgcaatgcagatcctgttaatcttgtc
catagtgaagagctaaagcagcctctattgttggtgaattcaactctccgggcaccacat
ggctgtcacagacagtacatggccaacatgggctcgactgcgtcactggttctggcggtt
actgtgaatagtgctgaatcaatcaagctatgggggttggtggtgtgccatcacacttca
cctcgctacgttcctttccctcttcgctatgcttgtgagcttcttatacaagcatttggg
ctgcagctcaatatggagtttcagttggcattacaattggccgaaaagaagattctcaaa
acacagactttgctttgtgacatgctcctccgggatgctccatctggtattgtaactcag
tctcccagtataatggatattgtgaaatgtgatggggctgcgttgtactataatggaaca
tgttggttgatgggtgtcacaccaactgaatcacaggttaaaagtatagttgagtggctg
ctaaagaatcatggggactctacaggcctgagtactgacggtttggctgaagctggttac
cctgatgcagcttcactagggaatgcggtatgcggtctggctactgctagaatcagttca
aatgattttctgttttggttcagatctcagaccgccaatgaagtcttgtggggaggagct
gagcatgatccacatgataaggatgatggtgaaagaatgcacccaagaacatcattcaag
gcttttcttgaagtagcgaaaagtagaagcttgccttgggaggtgtctgagattaatgcc
atccactctatacagctcataatgagagactcgttccaggaaatggaggaaactggcctt
aaggcaataaagcatgctagtcctagtggtactgcgaagcagtcccaaggcatggatggg
atcagttctgtggcatgtgaaatggtcaaattgatcgagacagctcaagttccaattttc
ggggttgattcagaaggtctcatcaatggatggaatgcaaagatagctgaattgacagga
ttagtagatagtgaagcaatggggaagtcccttgttaatgatattgttcatgaggactcg
cgtggagatgttgaaggtatcttatccagagcgttacaaggtgatgaagacaaaaatatc
gagctgaaactgaggaattttggacctcctcagcagaactcagacgtatatattgtggcc
aacagttgcacaagcaggaatcgtgcaaataatgttgttggcgtttgctttgtgggtcaa
gacattacttgtgaaaaacttgttacggataaattcgtccgcttgcaaggggattataag
gctatcatacaaagccttaacccattgattccaccaatatttgcatctgatgagaatgcg
tgctgctctgaatggaatgcagcaatggggaagctgactggtgtgacaagagatgaggct
attggtaaaatgctccctggggaaatatttggagactactgtcggttgaaaggcaaagat
tcaatgactaaatttatgattgtattatatcaaggaatcagtgggcaagaaattgagaag
tttccgtttggtttttttgatagagaagggaagtatgttgaagtgctcttaacagcaaac
aagaggactgatgccaatgagaatataattggttgcttctgcttcttgcaaatatttcag
cctgacctgcagtcggccatggaaggactcagacaagaggatagtaattcttcttcaaaa
cttaaggaattgatttacatgcgccaagagatgaaaaatcctttgaatggtatcaggttt
actcacaaactccttgaaaatacgattatttctagttatcagaagcaatttcttgacact
agtgatgcatgtgaaagacaaatcatggcaatccttgagaatatggatacgaggagcata
gagcaaggcagtgtggtgctgaacatggaagaatttctcttaggaagtgttttggatgcc
attgtgagtcaatcaatgatctcactgaggcaaagaaatgtacagtttttgcatgaggtt
ccaaacgaaattaaatctctatatttgcatggcgaccgaatcaagcttcagttggttctg
tcagatttcttgcttaatgtggtgcttcatgcatctccaaatggctgggttgaaatcaga
atttcaccaggtctaaaactaataaaggacggcaatagctatatccgtttacagttcaga
atgactctctctggtcaagggcttccaactgcactaatcgaagatatgcttgatgatgga
aatcgatggactacgcaagaagggcttgggctaaacctatccaggaaacttctcagcaga
atgaatggtcgagtgcagtatgttagagagcatgataagtgttacttcctcattgacatt
gaacttggaacaaggaaagaaaggcagatgatgttactgacacaagcagataagagcgca
tcaccttga
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