Fragaria vesca (woodland strawberry): 101300979
Help
Entry
101300979 CDS
T02666
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37e
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
fve04141
Protein processing in endoplasmic reticulum
fve04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101300979
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101300979
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101300979
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fve01009
]
101300979
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101300979
03009 Ribosome biogenesis [BR:
fve03009
]
101300979
03110 Chaperones and folding catalysts [BR:
fve03110
]
101300979
04131 Membrane trafficking [BR:
fve04131
]
101300979
03051 Proteasome [BR:
fve03051
]
101300979
03029 Mitochondrial biogenesis [BR:
fve03029
]
101300979
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
101300979
Protein phosphatases and associated proteins [BR:
fve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
101300979
Spliceosome [BR:
fve03041
]
Complex B
Other components
Prp19 complex
101300979
Complex C
Prp19-CDC5 complex
101300979
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
101300979
Chaperones and folding catalysts [BR:
fve03110
]
Heat shock proteins
HSP70 / DNAK
101300979
Membrane trafficking [BR:
fve04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
101300979
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
101300979
Proteasome [BR:
fve03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
101300979
Mitochondrial biogenesis [BR:
fve03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
101300979
Exosome [BR:
fve04147
]
Exosomal proteins
Proteins found in most exosomes
101300979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
ParM_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
101300979
NCBI-ProteinID:
XP_004292156
LinkDB
All DBs
Position
LG2:complement(4673262..4675242)
Genome browser
AA seq
551 aa
AA seq
DB search
MALAAKREAPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTNECRLIGDAA
KNQVTTNPINTIFDAKRLIGRRFSDACVKSDMKLWPFKIRGVGDRPMIMVNYKNEKKEFA
PEQISSMVLSKMREIAEAYLGHAVKNVVITVPAYFNNFQRQATKDAGVIAGMNVMRVLNE
PTSAAIAYGLDKRATNIGGNNVLIFDLGGGTFDVSLLQIEDEIFKVKATAGDTHLGGEDF
DNRMVNHFRQEFEKKHKKDISNDPKALRRMKTSCERAKRTLSSTAETTIEIDSLFEGIDF
HSKITRAKFEELNMDLFRKCMKTVEDCVGDAKMDINSIQDIVLVGGSSRIPKIQQLLQDF
FNGKELCKSINPDESVAYGAAVQAAVLQGDIEKVQDLLLLDVTPMSIGLETHTDAFEVFI
PKNTTIPTKKTKFATTIVNNQSGLIVPVYEGEETIAKKNKLLGEFVLNGIPRGVKGKPQI
IICFEIDANGILIVSAEEKRLQIKNTITISNYRGVLSNVEIEKMIKIEEKYKLEEDEYNK
KGFSSSALRRL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcattagcagcaaaacgcgaggctccagctatcggcatcgatcttggaactacttac
tcatgcgttggggtttggcaacacgatcgcgtagagatcatagccaatgatcaaggcaac
agaacaacaccgtcctatgttgctttcactaatgaatgccggttgatcggtgatgctgcc
aagaaccaagtcaccaccaatccaatcaacactatttttgatgcaaagcgattaatagga
agaagatttagtgatgcgtgtgttaagagtgatatgaaattatggccctttaagattcgt
ggtgtgggtgacaggcctatgattatggtcaactacaaaaatgaaaagaaggaatttgcc
cctgaacaaatatcttcaatggtccttagtaagatgcgtgaaattgcagaggcctacctt
ggacatgcagtaaagaatgtcgttataacagtccccgcatactttaataactttcagcga
caagcgacaaaagatgctggtgtgatagcaggcatgaatgtgatgcgcgtccttaatgag
ccaacatccgcagctattgcatacggtcttgacaaaagggccacaaacattggtggtaat
aatgtcctcatttttgatcttgggggtggtaccttcgatgtttccctccttcaaattgaa
gatgagatttttaaggtgaaagctactgcaggagatacacacctcgggggtgaagatttt
gataatagaatggtgaaccactttaggcaagaatttgagaagaaacacaagaaagacatc
agcaatgaccccaaagcactaagaagaatgaaaacatcttgtgagcgagcaaagaggact
ctttcttcgactgctgaaaccaccattgaaatagattctttattcgagggtatcgatttc
cactctaaaataacaagagcaaaatttgaagagcttaacatggatctctttagaaaatgc
atgaagaccgtggaggattgtgtaggggatgctaaaatggatataaatagtattcaagat
attgttcttgttggtggatctagtagaattcccaagatacaacagctattgcaagatttc
tttaatggtaaggagctttgcaaaagtatcaatcctgatgaatcagttgcatatggcgct
gcggtacaagctgcagttttgcagggtgacattgagaaggtgcaagacttgctcttgttg
gatgtaactcccatgtccattggtttggagactcacacagatgcatttgaggttttcatc
ccaaaaaacactaccattcccactaagaaaactaaattcgccacaactatcgtaaataac
caatctggtttgatagttcctgtgtatgagggcgaagaaacaatagccaaaaaaaataaa
ttgctgggtgagtttgtgctcaatggtattcctcgtggtgtaaaaggtaaacctcaaatt
attatttgttttgagatcgatgccaatggaattttgattgtatccgctgaggaaaaacgg
ctccaaatcaagaacacgatcaccatttcgaattacagaggtgtgttatctaacgtggaa
atcgagaagatgatcaagatagaagaaaagtacaagttagaggaggatgaatataacaag
aagggatttagctcttctgccctacgtaggttgtga
DBGET
integrated database retrieval system
