Fragaria vesca (woodland strawberry): 101301001
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Entry
101301001 CDS
T02666
Name
(RefSeq) fanconi-associated nuclease 1 homolog
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101301001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fve03400
]
101301001
Enzymes [BR:
fve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
101301001
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
101301001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
HIRAN
FAN1_TPR
Motif
Other DBs
NCBI-GeneID:
101301001
NCBI-ProteinID:
XP_011462554
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Position
LG4:7350904..7374190
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AA seq
956 aa
AA seq
DB search
MRGPSLKMLKGRESLTRLVGKRRRFLPNRHSLLSAPTQSSLNLDMVVSVDEQSSSNQQGE
DNGVVEGSVTCPVCGVKLSPQNSLINSHLDECLSRGTKRKLTQRTLLELNFCPVSKIQTC
SYDSEELGKDLFPAAHDESPVQDVSWGLSNLPAVEECQNQVDNLSRNPINKDEISDVPDF
DVTITQDDIYGVTLETFIVGRRFGDETELYLGASIHLSRDPNNVKDPNAIKVFHSDSGCL
KVLGFLPRKLAEYLSPLIDQYRLNFEGCVTSVPKHSIDVVPIQIVCHKTSDANDFNDDNV
FKCLWRNAQQVIESTKSCPPCAIKYQHNFCVFIREVLRNSSHLLTDDEKNFIESFISMSD
DSQRLFVRLYTRKGPWFRLSTISYPEVLDPQEAVKELSETGYTYCFNVTNNLSDDDIKEI
LDLLTVSELREILCILKQSCNRGLRKQDLIACLISYKEDLCPLLPSMVLHRIGSCVRISS
NAESLIWRAERLFFLNGEQDLSAFLLVDLGIVKYPTYKCIVSQQIFSSRDDLLGYEEAIE
VAQIVDEALDESNTQLVLKCIKIADSHLSNPAIEVAQIVDEALDESNTRLVLKCIKIADS
HLSNPVKSLTSEAMAPFLAHFSATFVYSKVVLLGISFLERERRYSDAIYLLKRLLNCFAQ
DRRRGYWTLRLSIDLEHMGYLNESLLVAEKGLLDEWVRAGSRVALQRRVLRLGKPPRRWK
TPSFAESVKRNIMEVNVQGRPLNCAIGMKSRFYGEDGEQCGVEQLALQYYAEEGGWQGVH
TESGIWLTIFGLLMWDIIFSSVPDVFRTKFQTAPLDLETDSFYLVRKNHIDSHLQKIHDG
MAEEILISSWDLHEGTACRGVNWRRHSLPELRAAVTCIGGPCVAAFCRHLAQDYRSWSSG
MPDLLLWRFHGKYRGEAKLVEVKGPRDKLSEQQRAWLLLLMDCGFNAEVCKVSPVV
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtccaagtctgaaaatgctcaagggaagagagagcctgacccgattggtgggc
aaacgccggcgcttccttcccaatcgtcattccctcctctccgcccctacccagagctcg
ttgaatctggacatggttgtgtcagtggacgaacaaagctcttcgaatcaacaaggagaa
gataacggtgtggtggaaggctccgttacttgccctgtttgcggtgtcaaactcagtccc
caaaacagcctcatcaattctcatctagatgagtgtctatctagaggaaccaaacggaag
cttacccagcgtactcttctagagttgaacttctgtccagtgtcgaaaattcaaacttgt
tcctatgactctgaagagttaggaaaggacctatttcctgcagctcatgatgagagccct
gtacaagatgtgtcatgggggttgtctaacttaccagctgttgaagaatgtcaaaatcag
gttgacaatctgtccagaaacccaatcaataaagacgagatcagtgatgtgccagatttt
gatgtgaccatcactcaggacgacatatatggggtgactcttgaaacttttattgttggc
cgcaggtttggtgatgaaaccgagttatatcttggtgcaagcattcatctctcaagagac
cctaataatgttaaggatcccaatgctatcaaggtttttcattcagattcaggatgcctt
aaagtgcttggttttctccctcgcaagctagctgagtacttgtctcctcttatagaccag
tatcgtctaaattttgagggatgtgtgacctctgttcccaagcattctattgatgttgtc
ccaatacagattgtttgccacaagaccagtgatgctaatgactttaatgatgacaatgtt
ttcaaatgtttatggagaaatgctcagcaagtaattgaatctactaagtcctgtccgcct
tgtgcaataaaatatcagcataacttttgtgttttcatacgtgaggttttgagaaacagt
tctcatctattgacagatgatgaaaagaacttcatcgagtcatttatttcaatgtcagat
gatagtcagaggctatttgttcggctttatacacggaaaggcccatggtttcggctctct
actatttcatacccagaagtattggatccccaagaagcagtgaaagagctatctgagaca
ggctatacatattgctttaatgtcacaaataatctatcggatgatgatataaaggagatt
ctggatttgctcactgtatctgagctgcgtgaaatcttgtgcattcttaagcagagttgc
aatcgtggcctaagaaagcaggatctcattgcatgtcttatatcttacaaagaagactta
tgcccattactacctagtatggttttgcatagaataggatcctgtgttagaatatcttca
aatgcggagtcccttatctggcgtgccgagagacttttcttcctgaatggtgaacaggat
ctgtcggcatttctactggtggatttgggaatagtcaaatatccaacttacaagtgcata
gtctcacaacaaattttctcatctcgagatgacttgcttggctatgaagaggccattgaa
gtggcacaaatagttgatgaagctcttgatgaaagcaacactcaattggtcttaaagtgc
ataaagatagctgattcccatttatccaatccggccattgaagtggcacaaatagttgat
gaagctcttgatgaaagcaacactcgattggtcttaaagtgcataaagatagctgattcc
catttatccaatccagtgaaatccttgacgtctgaagcaatggctccattccttgcccac
ttttcagcaacatttgtctactcaaaggtggttttactaggaatttcttttcttgagcgt
gagcgtaggtacagtgatgctatctatttactgaaaaggctactgaattgttttgctcaa
gatcgtagaagaggatactggacactacggttatccattgacttggagcacatgggttat
ttgaatgagagccttttggttgctgaaaaagggttactagatgaatgggtgcgtgctggt
tcaagagtggcacttcaaaggagagtccttcgcttgggaaaaccaccaaggcgatggaaa
actcctagttttgcagagtctgtcaagaggaatatcatggaggtcaatgttcaagggaga
cctttaaattgtgcaataggcatgaagagcaggttttatggagaagatggggagcaatgt
ggtgtagagcaactagctctgcagtattatgctgaggaaggtggatggcagggtgttcat
acagaaagtggcatttggctgactatttttggacttcttatgtgggatattatattttcc
agtgtaccagatgtcttccgcaccaaatttcagactgctcccttggatttggagactgat
agcttttatctagtgagaaagaaccatatcgactctcacctacagaaaattcatgatggt
atggctgaggagattctcatctcttcatgggacttacatgagggaacagcatgtagagga
gttaactggaggcgacattcccttcctgagcttcgtgcagctgttacatgcatcggtggc
ccatgtgtggctgcattctgtcgacatcttgcacaagattatcgtagttggtcaagtgga
atgccggatttacttctgtggcgcttccatggaaaatacagaggtgaagcaaagcttgtc
gaagttaaaggccccagggataaactctctgaacagcagcgagcatggctattgctttta
atggattgtggtttcaatgctgaggtctgtaaagtgagccctgttgtctga
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