KEGG   Fragaria vesca (woodland strawberry): 101301021
Entry
101301021         CDS       T02666                                 
Name
(RefSeq) DNA-repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101301021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fve03400]
    101301021
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     101301021
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5 TrAA12
Other DBs
NCBI-GeneID: 101301021
NCBI-ProteinID: XP_004302930
LinkDB
Position
LG6:11512089..11515887
AA seq 375 aa
MSHSKNGANKPGTRNLPSWMSSRDNESDKKPNGDGEGEGQKPRQGRGRASGNSSGESSSG
ATNVSKLLEGVVFVLSGFVNPERSILRSQALEMGAEYQPDWNSDCTLLVCAFSNTPKFRQ
VEAECGTIVSKEWISECYTQKKLVDIESYLMHAGKPWRKSSVSQDNRQDQRLSRPSISKK
QDGDSPSKPTASATLKHVKADVSVKECFSPSEVKKWAVDDLKKTISWLESQEEKPDPDEI
KQIAAEGILTCLQDAIASLEQKQDVQQITEQWNFVPRVVEELAKHEIKGNNSVAIPKEDL
CRQAMACKQIYEVELYNLDDDSSRKKKRKTDRQEDKGETVALCRGAAGYDSDETVEMTEE
EIDLAYDTLASNNTV
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgtctcattccaagaatggtgctaataagcccggtacccgaaaccttccttcttggatg
agttcaagagacaatgagagtgacaagaagccgaatggggatggtgaaggtgagggtcag
aagcccaggcaagggagagggcgcgcaagcggcaacagttctggtgaatccagctcggga
gcaactaacgtgtcgaaacttttggaaggggttgtgtttgtattgtctgggtttgttaat
ccggagcgcagcattttgcggtcacaggcattggaaatgggagcagaatatcagcctgat
tggaattcagattgcactctcttggtttgtgctttttcaaacacccctaagtttcgacaa
gttgaggcagaatgtggaactattgtttcaaaggaatggatatcagagtgttacacgcag
aagaagcttgttgatatagaaagttaccttatgcatgctgggaaaccctggcgtaaaagc
agtgtttcccaggacaacaggcaggaccaaagattatcccggcctagtatatctaaaaag
caagatggagattctccttcaaaaccaactgcctctgcaactttaaagcatgttaaagct
gatgtctctgttaaagagtgcttttctccatccgaagtgaagaagtgggctgtcgatgat
ttgaagaagacgatatcatggctggagagtcaagaagaaaagccagatccagatgagata
aagcagatagcagctgaagggattttaacttgtttacaagatgcgatagcttctctggaa
caaaaacaggatgtccagcaaataactgaacaatggaatttcgttcctcgtgtagtcgaa
gagcttgcaaagcacgaaatcaaaggaaacaactctgtggccataccgaaggaagatctt
tgcagacaggctatggcctgtaaacaaatttatgaggtggaactatataatttggatgat
gattcttcaaggaagaaaaaacgaaagactgataggcaagaggacaaaggggaaaccgta
gccttatgcagaggtgcagcaggatatgacagtgatgaaacagttgagatgacagaagag
gaaatagatcttgcatatgatactttagcttccaataatacagtgtga

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