Fragaria vesca (woodland strawberry): 101301022
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Entry
101301022 CDS
T02666
Name
(RefSeq) E3 ubiquitin-protein ligase ATL41-like
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101301022
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101301022
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
101301022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf_RING_Vps8_fungal
zf-RING_4
zf-RING_16
zf-Nse
Protocadherin
C2orf92
PHD_NSD
RINGv
zf-C3H2C3
Prok-RING_4
PHD
zinc_ribbon_16
zf-RING_6
FANCL_C
zf-RING_10
Zn_ribbon_IFT122_C
Motif
Other DBs
NCBI-GeneID:
101301022
NCBI-ProteinID:
XP_004303160
LinkDB
All DBs
Position
LG6:complement(15453011..15453933)
Genome browser
AA seq
251 aa
AA seq
DB search
MSSSSHTDLIMRLLDEPDDRPQMWPEKNPYDLNSKIMLIAIVSLSVVVVLVILLHTYARC
VLRRQSLRRAAALRRLGSTVAHVHSSAEPPKTGLEPSVIAALPVFVYGERRHEGDADVEC
AVCLSMMEDEEMARLLPNCKHSFHAECIDTWLNSHTTCPICRTEAEPRIDLQPEPREGPV
AGAAPTAPPLERVNSMLSCAAEGTSEDGKAVHSGSISRLSSSFRRMLSRDRSSRRVQSSV
QEDGFEDLERQ
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcctctcacacagatctgatcatgcgccttctcgacgaacccgatgatcgt
cctcagatgtggcctgaaaagaacccgtatgacttgaacagcaagatcatgctcatcgcc
atcgtttcattatctgtcgtggttgtgcttgtgatactacttcacacctacgcaagatgc
gtcctcagacgccagtcacttcgccgagctgccgccctacgccgcctgggttcgactgtt
gcccatgtccactcttccgccgagccacccaagaccggcctcgagccctccgtcatcgca
gccttgcccgtctttgtatacggtgagagacgtcatgaaggcgatgctgacgtcgagtgc
gccgtgtgtctgagcatgatggaggatgaagaaatggcgaggttgcttcccaattgtaag
cacagcttccatgcagagtgcatagacacatggctgaactcacacacaacgtgccctatc
tgccggacggaggcggagccccgtatcgatctccagccagagccaagagaaggtcctgtg
gccggcgcagcaccgacggctccgccgttggagcgggttaactccatgttatcatgtgcc
gcggaagggacgtcggaagatggtaaagcagtacatagtggttccatttcgaggttgagt
agttctttcaggagaatgcttagtagagatagatcttcgagaagggttcaatcttctgtt
caagaagatggttttgaagatttagagagacagtga
DBGET
integrated database retrieval system
