Entry |
|
Name |
(RefSeq) sm-like protein LSM1B
|
KO |
K12620 | U6 snRNA-associated Sm-like protein LSm1 |
|
Organism |
fve Fragaria vesca (woodland strawberry)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:fve00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101301040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:fve03019]
101301040
Messenger RNA biogenesis [BR:fve03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101301040
mRNA degradation factors
5'-3' decay
Lsm complex
101301040
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
LG1:6933653..6936137
|
AA seq |
128 aa
MSWAGPEDSLLSTSLASYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELELNKEELPPHMTLVPEAEIKRAQKAERDASDLKGSMRK
RMEFLDFD |
NT seq |
387 nt +upstreamnt +downstreamnt
atgtcgtgggcaggcccagaagactctctcctctcaacttctcttgcgagctatcttgac
aaaaagcttcttgtcttattgcgagatgggcgaaagctcttgggattactacggtctttt
gaccagtttgctaatgttgtgcttgaaggtgcatgtgaacgagttattgtcggtgatctt
tactgtgacatcccattaggtctgtatgtaatccgtggggagaatgttgtcttaatcgga
gaactggaattgaacaaggaggagcttcccccacatatgactctggtacctgaagcagag
ataaaaagggctcagaaagcagagagggatgcttcagacttaaaaggctccatgagaaaa
agaatggagttccttgatttcgattaa |