Fragaria vesca (woodland strawberry): 101301163
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Entry
101301163 CDS
T02666
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101301163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101301163
03036 Chromosome and associated proteins [BR:
fve03036
]
101301163
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101301163
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101301163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
101301163
NCBI-ProteinID:
XP_004291177
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Position
LG2:21670128..21675542
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AA seq
712 aa
AA seq
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MPGVASNSGDLSLVSYSPELPQPVVHSIHHGLKPPIARLSISWSRGNTLRVSVLRPPSDE
DSEASGRVVEVKLSNGDGENSDAKWRKIAYGSVTPFAHLQSRRSTISNLSNMSLSPSPYS
IDWWEYVMEYSKDINSLLGSLDSGPDPVIDDPKMVLKRVEEPTSIKAAWELMEIFYADKQ
SQPWQLERLVDWLADYDSLLSSTHPTVHSKLVNFQNELSSLQVIEDDPNYWDVLSSALAV
GWIDLVVKLLRLHGSYQLDQLGNRETENGLVEAVAVLISQKPRMRPGVEDGKLGECFKAK
PDFIKAWEKWRAQITKLDCSGFWLQCDHHQTREGLKNMIQVMLGNIDNLCNQTCHWIELF
ISHFLYVRPLTVGLESMYSLAQKCLQLKPMSGAHRLIDIILGILGENTEVVLAECSRAFG
PWMVAHAIELLTTGSDHAESLLHEERYNLGGISIAELHRLVYAQVLSSHALTWQIAPIYL
SSCMKQGMGLLEILLSKLPTEHNETLLKNIEICRLYELDTVSSDIMKIAGVYHWKHGRKG
CGVFWLQQARDEVRLTRIAQHLFDSVGKSISDESFKQWEGLIELLGSESKTTGGLDFLHK
YRDFKKSLKQVRDGKTTDAAHQAVESLISLMKNPSTPQRFWLPLLHDSLKLLNWQERPLL
NVSQTELLLNKLQELSMAKLRPDFIEADLPSEALSCVRLALASNLGRAILEE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgtcgcatcaaactccggcgacctatccctggtctcctactcgccggagctc
ccgcagcccgtcgtacactctattcaccatggcctcaagcctccgatcgctcgcctctcc
atctcgtggtcccgcggcaatactctgcgcgtgtcggttctccgtccgccgtccgatgaa
gacagcgaggccagcgggagagtagtggaggtcaagctcagtaatggagacggagagaat
agcgacgccaagtggcggaagatcgcatacggctccgtcacgccgttcgctcatctccag
agccgccggagcaccatctccaacttatcgaacatgtctctcagtccatcgccgtatagc
atcgattggtgggagtatgtgatggagtacagcaaggacataaattcactcctcggtagc
ctcgattcaggtcctgatccggtgattgacgatccgaagatggttttaaagagagtcgag
gagcctacctctataaaagcagcttgggagctgatggagatattttatgcagacaagcag
tctcagccatggcaattggaacggcttgttgattggttggctgattatgatagcttgctc
tcgagtactcacccaacagtccattcaaaacttgtgaatttccaaaatgaactttccagc
ttacaggttattgaggacgatcctaactattgggatgtgttatcatcagcactggcagtt
ggctggattgatttagtggtgaaactgttgcgcttgcatggatcttatcaactcgatcag
cttggaaaccgtgagacagaaaatggacttgtagaggcagttgctgttcttatttcacag
aagccacgtatgcgtccaggagtagaagatggaaagttgggtgaatgctttaaagcaaag
cctgattttatcaaggcatgggagaagtggagagcacaaattacgaagctagactgcagt
ggattctggcttcagtgtgatcaccatcaaacccgggagggattgaagaatatgatacag
gttatgcttggaaacattgacaatctctgcaatcaaacttgccactggatagagctgttc
atctctcactttctatatgtcaggccattaacagtgggtctcgaaagcatgtatagccta
gcccagaaatgcttacaattgaaaccaatgtcaggtgcccataggttgatagatattatt
cttggaatccttggggaaaataccgaggttgtcttggcggaatgctctagagcatttggg
ccatggatggttgcccatgccattgagttgttgaccactgggagtgatcacgcagaaagt
cttctacatgaagaacgctataacttggggggaattagtatagcagaactacatcggctc
gtctacgctcaagttttatcatcacatgcattgacttggcaaattgctccaatctatttg
tcctcgtgtatgaagcagggaatgggtttgttagagattttgctgtctaagctgcctact
gaacacaatgaaacactgcttaagaatatagagatttgtcgtctttacgaacttgatact
gttagctcagacattatgaagattgctggggtgtaccattggaagcatggtagaaaaggt
tgtggagttttctggcttcagcaagcccgagatgaagttcgccttaccaggattgctcag
catttatttgattctgttggaaagtcaatctctgatgagagttttaagcaatgggaaggc
ttaattgaattgttggggtctgaatccaagactaccgggggtctagacttcctgcacaag
tatagggatttcaagaagtctctcaagcaggttcgtgacggaaaaactactgatgctgct
catcaagctgtagaatctctgatatcgcttatgaaaaacccatctacacctcaacgcttc
tggctgcctcttcttcatgactcgttgaagctgctaaactggcaggagcgtcctctgcta
aatgtctctcagacagagctcttgctcaataaactgcaagagttgtccatggctaagctc
cgtccggactttatcgaagcagacttgccatcagaggccctgagctgtgtgaggttggct
cttgcttcaaatcttggacgagccatcttggaggagtaa
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