KEGG   Fragaria vesca (woodland strawberry): 101301242
Entry
101301242         CDS       T02666                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03020  RNA polymerase
fve03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101301242
  09124 Replication and repair
   03420 Nucleotide excision repair
    101301242
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fve03021]
    101301242
   03400 DNA repair and recombination proteins [BR:fve03400]
    101301242
Transcription machinery [BR:fve03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     101301242
  RNA polymerase III system
   RNA polymerase III
     101301242
  RNA polymerase I system
   RNA polymerase I
     101301242
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101301242
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat
Other DBs
NCBI-GeneID: 101301242
NCBI-ProteinID: XP_004307246
LinkDB
Position
LG7:complement(13153155..13157133)
AA seq 206 aa
MVLTEEEIMRLYRVRKTVMQMLKDRDYLIVDHDLNMTMSQFKNKYGEHMKREDLTINRRK
RGDESDQIYVFFPDEPKVGVKTMKSYITRMNQENVIRAILVAQQNLTPFAKTSISEMGSK
YHLEIFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTVKETQLPRIQLIDPIARYYG
LKRGQVVKIIRPSETAGRYVTYRYVI
NT seq 621 nt   +upstreamnt  +downstreamnt
atggttttgactgaagaggaaattatgaggctctacagggttcgaaagacagttatgcaa
atgctgaaagatagggactatttgattgtggatcatgatctcaacatgacaatgtcgcag
tttaagaacaaatatggagagcacatgaaaagggaggaccttactatcaatagaaggaag
agaggtgacgagtctgatcagatttatgtgtttttccctgacgaaccaaaagttggggtc
aagacaatgaagagttacatcacacgcatgaatcaggagaatgtgataagagcaatattg
gttgctcaacagaatctgactccttttgcaaagacctccattagtgagatgggttcaaag
taccacttggagattttccaggaggcagaattgttggtgaatattaaagaacatgttcta
gttcctgagcatcgggttcttacaaatgaggaaaagaagactttgctggagaggtacact
gtgaaagaaacacagcttcctcgaattcagcttattgatccaattgccagatattacggg
cttaagcgtggacaagttgtgaagataatccggccaagtgagactgcaggacgatatgtc
acctaccgttatgttatctaa

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