Fragaria vesca (woodland strawberry): 101301425 Help Entry 101301425         CDS       T02666                                  Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism fve  Fragaria vesca (woodland strawberry) Pathway fve04148   Efferocytosis Brite KEGG Orthology (KO) [BR:fve00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     101301425  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:fve04131]     101301425 Membrane trafficking [BR:fve04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     101301425 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H Motif Other DBs NCBI-GeneID:  101301425 NCBI-ProteinID:  XP_004287898 LinkDB All DBs Position LG1:complement(9396535..9402065) Genome browser AA seq 1005 aa AA seqDB search MVHSAYDSVELISDCPTKIEAISSYGPKLLLGCSDGSLKIYAPDSSGSRSPPSDYHSQSL QKEPYSLERNLAGFSKKPLLSLEVLQSRDILLSLSETISFHGLPNLGTIAVITKAKGANV YSWDDRRGFLCFSRQKKVCIFRHDGGRGFVEVKEFGVPDVVKSMAWCGENICIGIRRDYM ILNSTTGALTDVFPSGRLAPPLVVPLPSGELLLSKDNIGVFVDQNGKLAHEGRVCWTEAP TVVVIQKAYGIALLSRYVEVRSLRAPYPLIQTIILRNARRLLQSNNAAIVALDYAVYGLF PVPLGAQIVQLTASGEFEEALSLCKLLPPEEASHRAAKEASIHIRCAHHRFDSGDYEDAM EHFVASQVDITYVLSMYPSIVLPKTTMVVDPDKLMDISTDSSYLSRGSSGMSDDMEPSPL SHVLESEESAALESKKMSHNTLMALIKFLQKKRFSIIEKATAEGTEEVVLDAVGDRESNR FMKINKGRGSTPVTSRAREMAAILDTALLQALLLTGQSSVALELLKGLNYCDVKICEEIL LKSNHHAALLELYKCNSMHHEALKLLQQLVEESKSNQVQPEVIQKIKPESIVEYLKPLCG TDPMLVLEYSMLVLESCPTQTIELFLNGNIPADLVNSYLKQHAPNMQARYLELMLAMDEN GISGNLQNEMVHIYLSEVLDWYADLSAQQKWEEQTYSPTRKKLLSALESISGYSPEALLK RLPADALYEERAVLLGKMNQHELALSLYVHKLHLPEMALSYCDRVYDSLAHQPSSRSSGN IYLTLLQIYLNPKRTTKNFERRIMNLVSPQNKGTPKVGSANTVKSKGGRGAKKIAAIEVA DDIRISQSGTDSSRSDGDADADADESGEEGGSTIMLDEVLDVLSRKWDRINGAQALKLLP RETKLQNLLPFMGPLLRKSSEAYRNLSVIKSLRQSDNLQVKEELYEQRKGVVKITSDSVC SLCRKKIGTSVFAVYPNGSTIVHFVCFKDSQSMKAVGRGSPLRKR NT seq 3018 nt NT seq  +upstreamnt  +downstreamnt atggttcacagcgcctacgattccgtcgagctcatctccgactgccccaccaagatcgaa gccatctcatcctacggccctaagctcctcctcggctgctccgacggatccctcaaaatc tacgctcctgattcctccggctcccgctcccctccctccgactaccactcccagtccctc caaaaggagccctactccctcgagcgcaacctcgccggcttctccaagaagccgctcctc tctctcgaggtcctccaatcccgagacatcctcctctccctctccgaaacgatatcgttt cacggcctccccaatctcggcaccatcgccgtcatcaccaaggccaagggcgccaatgtg tactcctgggacgaccgccgcggcttcctctgcttctcgcgccagaagaaggtctgcatt ttccggcacgacggtgggagaggtttcgtggaggtgaaggaattcggagttccggatgtg gtgaagtctatggcgtggtgtggagagaatatatgtatagggatcaggagagattatatg atactgaactctacaactggtgcattgactgatgtgtttccttcggggaggctcgcgccg ccgttggtggttcctcttccttcgggggagcttcttctcagcaaggataacattggggtt tttgtggaccaaaatgggaagcttgctcatgaaggcagggtttgttggacggaggcgcct acggttgttgttattcagaaggcctatggaatagctctgttatcgagatatgttgaggtt cggtccctacgagcgccatatccgttgatacaaacaattattcttcgaaatgctcgtcgt cttctccaaagcaacaatgctgccattgttgcattagactatgctgtttatggtctcttc cctgtccctcttggtgcgcagattgtacaattaacagcatctggtgagtttgaggaagct ttgtcattgtgtaagctgcttccgcctgaagaagcaagccatagagccgcaaaggaggca tcaatccatatcagatgtgctcaccatcgttttgattctggggactatgaggatgccatg gagcattttgtggcttcacaagtggatataacctatgtactttctatgtatccttctatt gttcttcccaagacaaccatggtagttgatccagacaaactgatggatatatctacagac tcatcatatctctcaagaggttcatctggtatgtcagatgatatggaaccctctcccctc tcacatgtgctggaatcggaggagagtgcagcacttgagtccaaaaaaatgagccataac actctcatggctctcattaagttcttgcagaaaaagagattcagcataattgaaaaagct actgctgaggggacagaagaggttgttttggatgctgttggagaccgtgagtctaatagg ttcatgaaaataaacaaggggcgtggcagcactccagttacctcccgtgctagggaaatg gcagctatactggatacagctctcctccaagctctacttcttactggacagtcttcagtg gccttggaattactgaaaggtctcaactactgtgatgtaaaaatatgtgaggagattctc ctaaaaagtaatcatcatgctgctttgttagaactttacaagtgcaattcaatgcaccat gaagctctaaaactattgcagcagttagtagaagagtcaaaatctaatcaggtccaacct gaggtaatccaaaagataaagccggagtcaattgttgaatatctcaagcctctttgtggc actgatcccatgctcgtcttggagtattcgatgcttgtccttgagagttgcccaacacag acaattgagctctttctgaatggaaatatcccagccgatttagtaaactcttatttgaag cagcatgctccaaacatgcaggccagatacttagaacttatgcttgctatggatgaaaat ggaatctcagggaatctgcagaatgaaatggtgcatatctatctatcagaagtacttgac tggtatgcagatttaagtgctcaacagaaatgggaggagcaaacttactcccctacgaga aagaaactattgtctgctttagaaagcatatcgggttatagtccggaggctttgctgaaa cgtcttccggctgatgctttatatgaagaacgtgcagttttgttgggcaaaatgaatcaa catgagcttgccttgtccctatatgttcacaagcttcatcttcctgagatggcactgtcc tattgtgatcgagtatatgactcattggcgcatcaaccgtcttcaagatcttctggcaat atataccttactctattacaaatctatcttaatccgaagagaacaaccaagaactttgag aggcggattatgaatttggtatcaccgcagaacaaaggaacgccaaaggttggttctgca aatacagttaaaagtaaaggaggtcgtggagctaagaaaattgctgcaatagaggtggca gatgacataagaatcagtcaaagtggcactgacagtagtaggagtgatggagatgcagat gcagacgcagacgaatctggtgaggaaggagggtcaacaatcatgcttgatgaggttctt gatgtgttgagcagaaagtgggacagaataaatggagctcaagctctcaaacttttgcct agggagactaaactacagaacttgcttccgtttatgggaccccttttgagaaaatcaagt gaagcttacaggaatctttcagtgataaaaagtttaagacaaagtgataacctgcaggtt aaagaagaactctacgaacaaaggaaaggggtggtaaagatcacaagcgacagtgtgtgc tccctttgcagaaagaaaataggaacaagtgtgtttgctgtgtatccaaatgggagtaca atagtgcattttgtttgcttcaaagactcccaaagtatgaaagccgtgggcagaggatct cccctaaggaagcgatga

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