KEGG   Fragaria vesca (woodland strawberry): 101301463
Entry
101301463         CDS       T02666                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:fve01009]
    101301463
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fve03036]
    101301463
Enzymes [BR:fve01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     101301463
Protein phosphatases and associated proteins [BR:fve01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101301463
Chromosome and associated proteins [BR:fve03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101301463
SSDB
Motif
Pfam: JmjC JmjN zf-C5HC2 KDM5_C-hel
Other DBs
NCBI-GeneID: 101301463
NCBI-ProteinID: XP_004292214
LinkDB
Position
LG2:complement(6284971..6290316)
AA seq 859 aa
MENNSVPPGFAPRTSFKLKKAEVSVVGVEGTDRSNAVVDSSKQGSTQMDSTSEMTALEKV
KTFLQQRPWLLFDQTDHTSVQPDPQQFQMEPPPKACLSNGVTRGSPESTYCVKEPRLPKG
VTHGCPESGYCVKVTERWRPEGGIIEKLDKAPVFYPTHEEFKDTLTYITSISARAAQFGI
CRISPPPSWIPPPPIEENSIWRSSTFASHIQRIDGLRSKLDGSDESRKKKRRISTVGLDC
GFEFTSSMGEAGQSDVNCFESERGPEFTLDSFKRYADDFKRQYFRKSDVIGNQEQWEPSV
ENIEAEYTRIVENPTEGIEVLCGNYLDTKGLGSGFPIVSPDTPECLQSGWNLNNLPRLPG
SLLSFESHDTCHILVPQTRVGMCFSSSLWRVEEHHLYSLCYNHLGAPKVWYGVPGSSRIR
FEAAKTKSFPDLLKQHRLVKQVSPSALKSEGTPVFCCIQRPGEFVLVFPGAYHSEFDCGF
NFSESACFAPLDWLPYGQNAVELYSERERKTSISYDKLLLGAAREAVRAQWEISLLKNKK
TSEGLRWKSACFKDGILTELLKTRLKSEEVRRKYFCTSLKSQKMNSDFDATIKRECSICF
CDLHFSAVGCPCSVDRYSCLFHAKQRCFCDWSNKFVLYRHEIKELNLLVEALEGKLSAVI
KWAKDDLGLYLHEHLPISLTDKTKLKEYTSEDASSPVSTCDTASSIKAELKARMLQSTIS
NMLKANRDPIASTDAASSIRAELKARLLQSSISKTLTGNDNPLDAAAANGNGRNFVSSQS
TISDEHKGMCTPQQPVAMVGTPILPIEVASDVSSVTSSESSSESDDIIPHLGKSSESSHQ
AESRAPQDCVHVLSDDSDG
NT seq 2580 nt   +upstreamnt  +downstreamnt
atggaaaacaattcggttccacctggttttgcgcctaggacgtccttcaagctgaagaag
gcagaagtctcagttgtgggagttgaaggaaccgataggtccaatgctgttgtggattct
tccaaacaagggtcaacccagatggactcaacatctgaaatgaccgccttggagaaggtc
aaaacatttcttcagcaaaggccatggttgcttttcgaccaaactgatcacacttcagtg
cagcctgacccacaacagtttcaaatggaaccccctccaaaagcttgcctctcaaatggt
gtgactcgtggaagcccagaatccacttattgtgtaaaggaaccccgcctcccgaaaggt
gttactcatggatgtccagaatccggttactgtgtaaaggtaacagaaaggtggcgtcct
gagggtggaataatagagaagcttgataaggctcctgttttctacccaacacatgaggaa
tttaaggacactctcacgtatatcacaagtataagtgcaagagcagcgcaatttggtatc
tgtcgtattagtcctcctccttcctggatacctccacctcctattgaggaaaacagcata
tggagaagttccacatttgcttcccatattcagcggattgatgggttgcggagtaaactg
gacggctctgatgagagcagaaaaaagaagagaagaatctcaacagtgggtttggactgt
ggatttgaatttacctcaagtatgggtgaagcaggacagtctgatgtcaattgctttgag
tcggaacgtggtccagaattcactcttgacagttttaagaggtatgcagatgatttcaag
cgtcagtatttccgcaaaagtgacgtcataggtaatcaagagcagtgggagccatcagtg
gagaatatcgaagctgaatatacacgtatcgttgaaaacccaactgaaggaatcgaggtg
ctttgtggaaattatttggacactaaagggcttgggagtggatttccaatagtatcacct
gatacccctgaatgcttgcaatctggctggaatttaaataatctacccagactgcctggt
tctcttctttcttttgaaagccatgacacatgtcatattttagtgcctcagactcgtgta
ggaatgtgtttttcatctagtctttggagagttgaagagcaccacttatactcattgtgt
tacaatcatctgggtgctcctaaagtatggtatggtgtccctgggagttcccgtatacgt
tttgaggcagccaaaacgaagtcctttccagatttattaaaacagcataggctggttaag
caagtatccccctccgcattgaaatcagagggcacacctgtcttttgttgcattcagcgt
cctggagagtttgttcttgtcttccctggagcttatcattcagaatttgattgtggcttt
aatttttctgaaagtgcatgttttgctcctctagactggttgccttatggacagaatgct
gttgaactttactctgaacgggaaaggaaaacatccatatcctatgataagctgttgctt
ggagcagctagggaagctgtaagggcacaatgggaaatttcactgttgaagaacaaaaaa
acctcagagggtttacgctggaaaagtgcctgctttaaggatgggattttaacagaacta
ctcaagacgcgtctcaagtctgaagaggttcgaaggaaatatttttgcacctctttgaag
tcacaaaagatgaattcagattttgatgctaccataaaaagggaatgcagcatttgtttc
tgcgatcttcatttctctgcagtaggttgtccttgttctgtagacagatactcgtgtcta
tttcatgcaaagcagcgctgtttttgtgattggagtaacaagtttgtcctctaccgtcat
gaaatcaaggagttaaatctacttgttgaagctttggaaggaaaattaagtgcagtcatc
aaatgggcgaaagatgatcttggcctatatttgcatgaacatcttcccatctctctgaca
gataaaacaaagctgaaagagtacacatcggaagatgcatcttcaccagttagcacttgt
gacactgcttctagcataaaggcggaattgaaggcgcgtatgctgcaatccactatttca
aacatgttgaaagcaaaccgtgatccaatagcatccactgatgctgcttctagcatcagg
gctgaattaaaggcacgtctcctgcagtcttcaatctccaagacattgacaggaaatgat
aatccgctagatgctgcagcagccaatggcaatggtagaaattttgtttctagccaatca
acaatctcggatgaacataaaggcatgtgcactccgcaacagccagtggcaatggtagga
actcctattctgccgatagaggtggcctctgatgtttcctctgtaacttcaagtgaatca
tcctcggaatctgatgatataataccacatcttggcaagtcttcagaatctagtcatcaa
gcagaaagtagggcacctcaggattgcgttcatgttcttagtgatgacagtgatggttaa

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