Fragaria vesca (woodland strawberry): 101301470
Help
Entry
101301470 CDS
T02666
Name
(RefSeq) serine/arginine-rich splicing factor SR45
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101301470
03015 mRNA surveillance pathway
101301470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101301470
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101301470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
HU-CCDC81_euk_1
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
101301470
NCBI-ProteinID:
XP_004294198
LinkDB
All DBs
Position
LG3:complement(11404283..11409754)
Genome browser
AA seq
397 aa
AA seq
DB search
MAKKPIRGRRSPPSGSGSGSSSLSRSFSGSSSRSSSRSRSRSSASSSSRSGSSRSPSPRS
SKRSPGARRGRSPPPAKRASPPPRKASPAHESLVLHIDKLTRNVNEGHLKEIFGNYGEVV
NVELAMDRSVNLPKGFGYVEFKMRADAEKALLHMDGGQIDGNVVQAKFTLSQRQKSPPPK
AVVTAPKRDAVKADGINADKDGPKRLREASPRRRPPSPPRRSPVVRRGGSPRRRLDSPPP
RRRPGSPYRRVDTSPRRRPISPSRGRSGSPPPRRRSPARVSPRRMRGSPPARRRGSPPRR
RSPPRRARSPPRRSPIIRRRTRSPIRRPARSRSRSISPRRGRGPATRRGRSSSSSSSGSP
GPRKVGRRIPSRSPRRPARGRSSSNSSRSSSPPPRKT
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagccaatccgcggccgtcgctcgccgccttccggctccggctccggttca
tcctcgctctcccgctcattctcgggctcttcctcccgctcctcctcgcgctcccgatct
cgctcctccgcctcctcctcttcccggagcggcagctctcgtagtcctagcccccgctcc
tccaaaagaagtcctggcgctcgacgaggtcgatctcctccaccagctaaaagggcatct
ccacctccaaggaaagcttctccggctcatgagtcacttgttcttcacattgataagctt
acaaggaatgtgaatgaaggccatttaaaagaaattttcggaaactatggtgaagttgta
aacgttgagctggcaatggatcgcagcgttaatcttccaaaaggatttggatacgtggag
ttcaagatgagagcagatgctgaaaaagcgctattacacatggatggtggtcaaattgat
ggtaatgtagttcaagcaaagtttacattatctcagcgtcagaagtcgccaccacctaag
gctgttgtgactgctccaaagagagatgctgtgaaagctgatggtattaatgctgataag
gatggaccaaagcgtttgagggaagcttctcctcgtcgaagaccaccttcaccaccaagg
agatctccagtagttcgtcgaggtggatctccaagaagacggctagattctccaccaccg
cgtcgtagaccaggttccccttaccgtcgcgttgatacatctccaagaaggagacctatt
tctccatcccgaggccgttctgggtctccgccaccaaggcgtcgatccccagctagggtt
tctccaagaaggatgcgtggcagcccccctgctcgcagacgtggctctcctcctaggcgc
cgttcacctcctcgacgggctcgtagtcctcccagaaggtctccaatcattcgtaggcgt
acccgttctcctattcgtaggcctgctcggtcacgttcaagatcaatttcacctcggaga
ggcagaggtcctgcaacgagacgtgggaggtcatcatcatcatcatcctctggatcacct
ggtccacgcaaggtaggccggaggataccatctcgtagtccaagaaggcctgcaagggga
agaagcagtagcaacagcagcagaagcagttcaccgcctcctcgtaagacatag
DBGET
integrated database retrieval system
