KEGG   Fragaria vesca (woodland strawberry): 101301613
Entry
101301613         CDS       T02666                                 
Name
(RefSeq) WD repeat-containing protein 82-B
  KO
K14962  COMPASS component SWD2
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101301613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    101301613
   03036 Chromosome and associated proteins [BR:fve03036]
    101301613
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     101301613
Chromosome and associated proteins [BR:fve03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     101301613
    COMPASS/SET1 complex (yeast)
     101301613
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SPT8 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th eIF2A KNTC1_N Cytochrom_D1 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 101301613
NCBI-ProteinID: XP_004287819
LinkDB
Position
LG1:8618880..8621306
AA seq 332 aa
MAGVPEREDKVSLELTEEILQSMEVGLAFRDYSGRISSLDFHKASSYVVTASDDESIRLY
DVSTATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFKGHH
DRVVSLSLCSRKECFISGSLDRTVMLWDQRVEKCQGLLHVQGRPATAYDDQGLVFTVAFG
GYIRMFDARMYEKGPFDIFSVGGDMSDANVVKFSNDGRLMLLTTTDGHIHVLDSFRGTLL
STYNVKPVSSTATLEASFSPDGMFVMSGSGDGSVYAWSVRSGKEVTSWLSTESEPPVIKW
APGSLMFATGSSELSFWIPDLSKLAAYVGGRK
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcaggtgtaccggaaagagaagacaaggtctctctggagctgacggaggaaattctc
cagagcatggaagtcgggctcgctttccgagactacagtggtagaatcagttcgttggat
tttcacaaggcttcgagttacgtagtgactgctagtgatgatgagtcgattcggttatat
gatgtctccactgcgacgtgcttgaagacaattaacagcaaaaagtatggggttgatttg
gtttgctttacttctcatcctaccacggttatatactcttcgaaaaatggctgggatgaa
tcgctgaggcttctctcgttgaatgacaataagtacttgcgctatttcaaaggccatcac
gacagggttgtctcacttagtttgtgctcccggaaagagtgcttcatctctggttctctt
gataggacagttatgctttgggatcaacgagtcgagaaatgtcagggtcttttacatgta
caaggaaggcctgctacagcttacgatgaccaagggctagtttttacagttgcatttggt
ggttacatacgaatgtttgacgcccgcatgtatgaaaagggtccctttgatatattttct
gttgggggagacatgtctgatgcaaatgttgtaaagttcagtaatgatgggagacttatg
ctgttaacaactacagatggacatattcatgtacttgattcgttccgcggcacgctttta
tccacttacaatgtaaagcccgtgtcaagcactgctacattagaggcttcttttagccca
gatgggatgtttgttatgtcaggttcaggtgatggtagtgtctatgcttggagtgttcga
agcgggaaagaagtcacaagttggctcagtactgaaagtgaacctcctgttatcaaatgg
gctccaggaagcctcatgtttgcaactggttcttctgaactatcattttggataccggat
ttgtctaaactggcagcttatgttggtggaaggaagtag

DBGET integrated database retrieval system