KEGG   Fragaria vesca (woodland strawberry): 101301769
Entry
101301769         CDS       T02666                                 
Name
(RefSeq) SEC12-like protein 2
  KO
K14003  prolactin regulatory element-binding protein
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101301769
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:fve04131]
    101301769
Membrane trafficking [BR:fve04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    101301769
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz ANAPC4_WD40 WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_TEP1_2nd Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_CAF1B_HIR1 WD40_like Beta-prop_RIG_2nd Nbas_N Beta-prop_IFT122_1st Beta-prop_WDR75_1st Ig_Shg Smim3 OppC_N RsgA_GTPase
Other DBs
NCBI-GeneID: 101301769
NCBI-ProteinID: XP_004297374
LinkDB
Position
LG4:18647117..18650326
AA seq 379 aa
MNHIEYGIPLYGVGWVPNGAQPPETESTQSVPDSSHIVLTGGGGEGSTGVKNAVLVVRFD
PSATSISHEPVAELRLGSELPYRMAVHPDGLICSFPESCSWFEWEKELGDGAYKLSVRRS
DRVLEQLQNVGQQLALAFNKEGSMLATGGEDGKLRVFKWPSMEIMFTEDQAHKTVKQIDF
SHDGKFLVSLGQSGPGRVWDVSSAAVVATLKTEKNEVFCACKFSLVNNGSQVLHLADKDG
IIVTWNTTTWKRVRSKRITRDGIMSFDVSADGKLLACGTTAGDLLILKSAGLQIHKVVPK
AHSGFVTALSFSHDSRVLASASMDSSARVSTVEEVKKKGVNLWVVILIILVSILAYFLND
PESWTMLKSELEKFYSSWR
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgaatcacatagagtacggcatccctctctacggcgtcggctgggttcccaacggagct
caaccaccggagaccgagtcgactcagtcagttcccgactccagccacatcgtgttgacc
ggcggtggcggcgagggcagcaccggcgtcaagaacgctgtccttgtcgtccgattcgat
ccctccgcgacttccatctcgcatgagccggtggcggagctgaggttaggctctgagcta
ccttataggatggcggttcatcccgacgggctcatttgttcgtttccggaaagctgcagt
tggtttgaatgggagaaagaattgggggatggagcttataagctgagtgtgaggcgatct
gatagagtacttgagcaattgcagaacgtagggcaacaattggcgctggcgtttaacaaa
gaaggttccatgctcgccaccggaggcgaggatggaaagttgagggttttcaagtggccc
agcatggaaattatgttcactgaagatcaagctcataaaacagtcaagcagattgatttc
agccatgatgggaaatttcttgtctccttgggacaaagtggccctggtagagtctgggat
gtgagttctgctgcagttgtagctactttaaagactgaaaagaatgaggtcttctgtgca
tgcaaattttctctagtgaacaatgggagtcaagttctacatcttgcagataaagatgga
attattgtaacatggaacacaaccacatggaagagggttcgatccaagcgaattactcga
gatggcatcatgtccttcgatgtttcagctgatggaaagctccttgcatgcgggacaact
gctggagatcttttaatactaaagtcagctggattgcagattcataaagttgtccctaaa
gcacactctgggttcgtaactgcattgagtttttctcatgattcaagagtattggcttct
gcatcgatggactcaagtgcaagggtgtccacagttgaggaggtgaagaaaaagggagtg
aacttatgggttgttatactcataatcctagtatccattcttgcatatttcctaaatgat
cctgagagctggacaatgttgaagtctgaattggagaaattttacagctcgtggcgttaa

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