KEGG   Fragaria vesca (woodland strawberry): 101301841
Entry
101301841         CDS       T02666                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
  KO
K12842  U2-associated protein SR140
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101301841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fve03041]
    101301841
Spliceosome [BR:fve03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101301841
 Complex B
    101301841
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3 SAP
Other DBs
NCBI-GeneID: 101301841
NCBI-ProteinID: XP_011459623
LinkDB
Position
LG2:complement(33169019..33176241)
AA seq 979 aa
MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGENAAGSRTFVRGGTIN
PNERVKTDSQGEKSKDGVSVPKKGSRYVPSFLPPPLASKGKESDKKREEEKPKEKEKGKS
RNIDHFMEELKQEQELRERRNQEREHWRDGRPNENSVASSRFDEMPDEFDPSGKLLGSFD
DGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMN
RADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGATVILSGPS
GPPVTSVPSQNSELVLTPNVPDITVVPPEDDHLRHVIDTMALYVLDGGCAFEQAIMERGR
GNPLFHFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPSLPALRSP
EHEKESSSTYAAGRSRRVESERTLTDPQRDEFEDMLRALTLERSQIKDAMGFALDNADAA
GEIVEVLTESLTLKETPIPTKVARLMLVSDVLHNSSAPVKNASAYRTKFEATLPDIMESF
NDLYRGITGRITAEALKERVLKVLQVWSDWFLFSDAYVNGLRATFLRSGNSGVVPFHSVC
GDAPDIEKKTTSEDAGDAKTNQDAALAMGKGAATRELLNLPMAELERRCRHNGLSLVGGR
EMMVARLLSLEEAEKQRGYELDDDLKYGQNHSSSGRHSSSRKEMNIEPDPLGLSGWNRYV
EDEIQSEGKVSLSKAQTHTSPQPELKPFTTKEKSDPVLPASKWAREDDDSDDDQKRSAKG
LGLSYSSGSENAGDGPSKADEMEVATDVRIPAQPDSGLSEEQRQKLRRLEVSLLEYRESL
EERGIRSPEEIERKVAIHRKRLESEYGLSDSSEDASGRKRTSSERKDRRDDDSRDASRKR
HRSGSQSDSPLQKSSSRDRDREYDLDRDRERQRDRDRDRAHDFEGNRGRDWDRDKSGSRE
RDDHDRDRGRDRDRRRRMK
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgagctccttctccatcacgcggaagaagactcccttccagaagcaccgagaggaggaa
gaggccaagaagaagagagctgaggatgaaacagctcgcttatatgcagagttcgtggaa
tcatttcaaggggagaatgcggcaggctctaggacttttgtgcgcggcggaaccatcaac
cccaatgaaagggttaagaccgattcccaaggtgaaaagtccaaagatggggtatctgtt
ccaaagaaggggagtaggtatgtgccatctttcttaccaccgcctttggcatccaaaggg
aaagaatctgataagaagagggaggaggaaaagccaaaggagaaagaaaagggaaagtct
cgaaacatagatcactttatggaggagctgaagcaagaacaggaattgagggagaggcga
aatcaagaacgtgaacattggcgtgatgggcggccgaatgagaattctgtggcctctagt
cgttttgatgaaatgcctgatgaatttgatccaagtggaaaacttctgggatcatttgat
gatggcgatccacaaactactaatttatatgttggaaatctttcaccgaaggtggatgag
aattttcttttacgaacctttggtagatttgggcctattgccagtgtgaaaataatgtgg
cctagaactgaagaggaacggaggcgtcaaaggaattgtggctttgtagctttcatgaat
agagctgatggacaggcagcaaaggatgaaatgcaaggggtggttgtatatgaatacgag
ttgaagattggatggggaaagtctgtagctctcccatcacaagcgttacctgcaccccct
ccaggacatatggccatcaggagtaaggagggtgccactgtaattttgtctggtccatca
ggcccacctgtcacttctgttcctagtcagaattctgaactggttcttaccccaaatgtc
cctgatataacggttgttccaccggaagatgatcaccttcgccatgttattgatacaatg
gctttgtatgttctggatggtggatgtgcatttgaacaagctattatggaaaggggcaga
gggaatcctcttttccatttcttgtttgaacttggatcaaaagagcatacttactatgtt
tggaggctttattcatttgctcagggcgatactctgcaaaggtggcgaactgaacctttt
atcatgattactggtagcggaagatggatcccgccctctcttccagcattgagaagccct
gagcacgaaaaagagtctagtagcacatatgctgcagggagaagcaggcgtgtagagtcg
gaacgaacgctcactgatccacaaagggatgagtttgaggatatgttgcgtgcattaaca
ttagagaggagtcagataaaggatgctatggggtttgcattggataatgctgatgctgct
ggggagatagttgaggttttgacggaatctttgactcttaaggagacccctatccccacc
aaagttgctcgactcatgcttgtctctgatgtgctccacaatagcagtgctccagtgaaa
aatgcatctgcataccgcaccaaatttgaagcaacattaccagacataatggagagcttt
aatgatttgtatcgtggcataacaggaaggatcactgctgaggcccttaaggaaagagtt
ctgaaagtattacaagtgtggtcagactggtttcttttttcagatgcctatgtcaatgga
ttgcgggctacttttcttcggtctgggaactctggtgtggtacccttccactctgtatgt
ggtgatgcacctgatatagagaaaaaaactacttctgaagatgcaggtgatgctaaaact
aaccaagatgcagctttggccatgggaaaaggagcagctacgagggagctgttgaacctt
cccatggctgaattagaaagacgctgcagacataatggattgtctcttgttggtggtcga
gaaatgatggttgcacgattgcttagtctggaagaggcagaaaaacagaggggctatgaa
cttgatgatgacttgaaatatggacagaaccattcaagttcaggtagacattctagtagt
cgaaaagaaatgaatattgaaccagatccattgggactgtctggatggaatcgctatgta
gaggatgagatacaatctgaagggaaagtgtctttatcaaaggcccagacccataccagt
ccacaacctgaactgaaacctttcactacaaaagagaaaagtgatcctgttctaccagcc
tctaaatgggcacgagaggatgatgacagtgatgatgaccaaaagcgaagtgccaagggt
cttgggttaagctactcgtctggaagtgaaaatgctggtgatggtcccagtaaagctgat
gagatggaggttgcaactgatgtaagaattccagcacagcctgatagtggactaagtgaa
gaacagaggcaaaagttgagacgtttggaagtttctctgttagaatatcgtgaatctctt
gaggagcggggaattagaagtcctgaagaaattgagaggaaggttgcaatacatcgcaaa
cgacttgaatcggagtacgggttatctgattctagcgaagatgcttctgggcgtaagagg
acttcttccgagaggaaggacagaagggatgatgattcccgtgatgcttcaagaaagcgg
caccgcagtggaagccaaagtgatagcccgttacagaagtcatcaagcagagaccgggac
agggaatatgatttggatagagaccgggaaagacagcgggatagagacagggatagagcc
catgattttgaaggtaacagggggagggattgggacagggacaagagtggaagtagagag
agggatgaccatgatcgagatagaggaagagacagggataggagaaggagaatgaaatga

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