Fragaria vesca (woodland strawberry): 101301907
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Entry
101301907 CDS
T02666
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101301907
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101301907
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101301907
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_RING
Prok-RING_4
zf-RING_5
DUF1140
Motif
Other DBs
NCBI-GeneID:
101301907
NCBI-ProteinID:
XP_004288136
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Position
LG1:complement(12553065..12559190)
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AA seq
397 aa
AA seq
DB search
MGNGESTFEDSQDNFPPEPPSYAGTSMDSSHQQKLPFTRIGDDFNSLDQVIAALREAGLE
SSNLILGIDFTKSNEWTGKYSFNRKSLHAIGSTPNPYEQAISIIGRTLSPFDEDNIIPCF
GFGDASTHDVGVFSFYPDDRCCVGFEEALARYREIVPYLRLSGPTSFAPIIDAAIDIVEK
SNGQYHVLVIIADGQVTRSPDTPPGRFSTQEQATVNSIVAASKYPLSIILVGVGDGPWDA
MQKFDDNIPQRAFDNFQFVNFTKIMSDNRDLSQKEAAFALAALMEIPSQYRATQRLHFSS
YESEGGPRTRPLPPPRDVINHDNAVKSIPPMTSFPKVEPSAPGLPVAPVESVCPICLTNP
KDMAFQCGHTTCKDCGVSLSSCPLCRQPISTRLRLYT
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggggaatggcgaatcaacgtttgaagattctcaagataattttccacctgaaccacct
tcctatgcaggcacttcaatggactctagtcatcaacaaaagctaccatttacacgtata
ggcgatgatttcaactcgttggatcaggttattgctgctttgagagaagctggccttgaa
tcatccaatttaatacttggtatcgacttcacaaagagcaatgaatggacaggcaaatat
tcattcaacagaaaaagtcttcatgctatcggtagcacacctaatccttacgagcaagca
atctctataatcggacgcactttatctcctttcgatgaagataatataattccttgcttt
ggattcggcgatgcatcaacacatgatgtaggtgtgttcagcttttatcctgatgatcga
tgctgtgttgggtttgaggaagctcttgctcggtatagggagattgttccatacttaagg
ttatcaggtccaacctcatttgccccaataattgatgcggcaattgacattgttgaaaag
agcaatggacaataccatgttcttgtcattatagctgacggacaggttaccaggagccct
gatactccacccggaagattcagtacccaagaacaagcgactgtaaattccatagttgct
gctagcaaatatcctctgtcaatcatcttggttggagttggggatggaccgtgggatgca
atgcagaaatttgatgataacattccgcagcgagcatttgacaacttccagtttgtcaac
ttcaccaagatcatgtcagacaacagggatttatcacagaaggaagcagcatttgcactt
gctgcccttatggaaattccatctcagtacagagccacccaaaggcttcatttttccagt
tatgaatcggaaggtggtccacgtacaaggccacttccacctccacgcgatgtgatcaat
cacgataatgcagttaaatcaattccaccaatgacaagctttccgaaagttgagccatca
gctcccggcctgccagtagctcctgtggaatcggtgtgcccaatttgcctgacaaatcct
aaggacatggctttccaatgtggtcatacgacctgcaaggattgtggagttagtctttca
tcatgccctctgtgtcgacaacccatatcaacacgcctgagactctacacttga
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