Fragaria vesca (woodland strawberry): 101301983
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Entry
101301983 CDS
T02666
Name
(RefSeq) reticulocyte binding protein 2 homolog b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
fve03015
mRNA surveillance pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101301983
09122 Translation
03013 Nucleocytoplasmic transport
101301983
03015 mRNA surveillance pathway
101301983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101301983
03041 Spliceosome [BR:
fve03041
]
101301983
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101301983
Spliceosome [BR:
fve03041
]
Complex C
Other components
EJC/TREX
101301983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
101301983
NCBI-ProteinID:
XP_004302203
LinkDB
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Position
LG6:2394145..2398116
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AA seq
739 aa
AA seq
DB search
MSSPYPKLDNRTIDQWKVTELKEELKRRKLTTKGLKEDLIKRLDEAIRVEREAAERLERE
NAVRLERENAERLERENAERLERENAERLRRENAERLQRENAEKIERENAENIIEGNDEK
VDNGFNVDGEPHGVDAKTSTGFIDGQEKAENTVIDGSAEALNQGNFEEDYVLVDKQDAAI
VGEELIVQSTTVETTVTVTENVVAYLDLGGEGSQNTEAKKINEDPKPQLENEDPVPLLES
LDSKPQLENVDPKPQLESESLDATPKDAMLDSSAPNYQVSEVSTVLGSEVKYDYISTDSV
SINEKTELKDNIIADHVKLELDVKPEMVEPSSSDVVPVNGDSHPMDVEEPPESKASVRER
DDNYDTNADISKKNDSADVGYSEKLNLERSSGDDSMDEDVLDNKQFDSKYSSDYVGDKAE
KTEVPTAMEDSHVDVVGDDMSSDKVDTSDDNKNHPALPAEKRKLNDKAAVATNEPAVKRR
RWNSESLKVPEPQNSIQTPTTTPKDTSQTPILKRNFSRSNSTMSEDTPKERVVPPSQKPP
TNSLKIDHFLRPFTLKAVHELLGKTGKVTDFWMDQIKTHCFVTYSSVEEAVETRNGVYNL
QWPTNGGRLLVADFVDPQEVQTRVQNPQTPVTPVSAPVAPAISATAQHQPSPRLSRQQLQ
QQLPPPPSLPPPPPLSSLPPKERLPLPPPPPLLEKVDPPLVTLDDLFRKTKATPRIYYLP
LSQEQVEAKLAAQGRNPKQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaccatatccaaaacttgacaatcgaacaattgatcagtggaaggttacagag
ttgaaagaagagcttaagaggcgcaaattgacaaccaagggtttgaaggaagatttgata
aaacgtttggatgaggcgattcgagttgaaagggaagctgccgagaggcttgaacgggaa
aacgcagtgaggcttgaaagggaaaacgcagagaggcttgaaagggaaaatgccgagagg
ctcgaaagggaaaatgccgagaggcttcgaagggaaaatgccgagaggcttcaaagggaa
aatgccgagaagattgaacgggaaaatgctgagaatattatagagggtaatgatgagaaa
gtggataatggttttaatgttgatggagagccacatggagtggatgctaaaacaagtaca
ggcttcattgatgggcaggaaaaggccgaaaatactgtcatcgatggcagtgcagaagca
ttgaatcaaggcaattttgaagaggattatgttcttgtggataaacaggatgctgccatt
gttggagaggagttgattgtgcaatccactactgttgaaacaactgtcacagtcactgag
aatgtggtagcatatttagatttaggtggtgaaggttcacagaacactgaagctaagaag
ataaatgaggatccaaagccccagctggagaatgaggatccagtgcccttgctggagagt
ctggattcaaagccccagttggagaatgttgatccaaagccccagctggaaagtgagagt
ttagatgctacacccaaggatgccatgctcgactcttctgccccaaactaccaggtatct
gaggtcagcactgttttagggtctgaagtaaaatatgattatatttctactgatagtgtg
tcaattaatgaaaagactgaactaaaggataatataattgctgatcatgtcaaattagaa
ttagatgttaagccggagatggtggaaccatcatccagtgatgttgtcccagtcaatggt
gattcacatccaatggatgttgaagagccacctgagagcaaggcatctgttagagagaga
gatgacaactatgatactaatgcagacattagcaagaaaaatgatagtgcggatgtgggg
tactcggaaaaattaaatttagagagaagttctggagatgattctatggatgaggatgtg
ctggacaataaacaatttgattcgaagtatagttctgattatgtgggagataaggctgag
aaaactgaagttcctactgcaatggaggatagtcatgttgatgttgtgggagatgatatg
tcctctgataaagtggatacaagtgatgataacaagaatcatccagctcttcctgctgag
aaaagaaagcttaatgataaagcagcagttgcaaccaatgagcctgctgtaaagaggcgc
aggtggaactctgaaagtttgaaagttccagagccacaaaactctattcaaacacctacc
accacacccaaagatacttctcaaacccccattctgaagcgcaacttctcgagatcaaac
tctacaatgagtgaggatactcctaaggaacgtgttgttcctccatcgcagaaaccacca
actaattccttaaagatagatcattttttgcggcctttcaccctgaaagctgtgcatgaa
cttcttgggaaaactgggaaggttactgatttctggatggaccagatcaagacccattgc
tttgttacttattcatctgtggaagaggccgtggagacacggaatggtgtgtataacttg
cagtggcctaccaatggagggcgcctcttagtggcggactttgttgatcctcaggaagta
caaactcgggttcagaatcctcagactcctgttactccagtgagtgctcctgttgctcct
gctatctcggccactgcgcagcatcagccttcacctcgtctgtctaggcagcaactgcag
cagcagcttccacctcccccctctctcccccctccaccacccctgtctagccttccccca
aaagagcggcttcctctgccacccccacctcctctgttggagaaagttgatcctccgctc
gtcactttggatgacctcttccgaaaaactaaagcaacccctcggatctattacctacct
ttatcccaagaacaagtagaggcaaaacttgcggcccagggaagaaatcctaagcagtag
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