Fragaria vesca (woodland strawberry): 101302002
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Entry
101302002 CDS
T02666
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101302002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101302002
03051 Proteasome [BR:
fve03051
]
101302002
Membrane trafficking [BR:
fve04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
101302002
Proteasome [BR:
fve03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
101302002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
UBA_7
Ubiquitin_2
Dsc3_N
UBA_HOIP
Rad60-SLD_2
XPC-binding
Motif
Other DBs
NCBI-GeneID:
101302002
NCBI-ProteinID:
XP_004287736
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Position
LG1:complement(7892861..7897692)
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AA seq
523 aa
AA seq
DB search
MGGGADDVLTKSDGGDGVNINVKTPNGSKYAAQISLDATVRALKEALSPKCDVPVDQQRL
IYKGRILKDDQTLRSYGLEADHAVHLVRSFAPSAAATTADATNAGSENSTQARGVGSNGD
GALGGSGNVNRMGSTGGLFGLGFPDLEQVEQQITRDMMNIPLFDDLMNSTDIVQNMVTNN
PQMREIIDRNPELGHILNDPATIRQTLEASRNPELMREMMRNSDRAMSNIESSPEGFNML
RRMYENVQEPLLNASTMAGNTGFDSSNPLAALFTPQGGNPTRTQLTNSSTASSDSATSPP
APNTVPLPNPWSPTGWDGRSQTPAGQTGLGFPEFEAMMGTTQDNTLLNQAVQNPAVSQLM
QNFISNPQSISESIQSDPQLRSMLSSNPLFREMIQNHEFFRQLASPETMQLFFMLIQALL
SLLGDEEEQATQEPGETGQTDGGTGPVDNSGLQALLNLFGGLGTGSPAVPNRPSVPPEEL
YAAQLSQLQEMGFFDRQENIRALMTSAGNVHAAIERLLGNSGQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcggagccgacgacgttttgaccaaatcggacggcggagatggagtcaacatc
aacgtcaaaacccctaatggctccaagtacgccgctcaaatcagcctcgacgccaccgtc
cgggcgctcaaggaagctctctcgccgaagtgcgacgttccggttgatcagcagaggctg
atttacaagggccggatcttgaaggatgatcagactctccggagctacggtctggaggcg
gatcatgctgttcacttggttcgtagctttgcaccatctgcagcagccaccactgctgat
gcaaccaatgctggaagtgaaaattctacccaagcaaggggtgttggatctaatggtgat
ggagcattgggaggatctggcaatgtcaataggatgggtagcactggtggtttatttgga
ttggggtttcctgacttggaacaagtggagcaacaaattacaagagacatgatgaacatc
cctctctttgacgatcttatgaatagcactgacattgtacagaacatggttacgaacaac
cctcaaatgcgtgagattattgatcggaatcctgagttagggcacattctcaatgatcct
gccactattcgtcagacacttgaagcatcaagaaaccctgagcttatgcgtgagatgatg
cgcaacagtgacagggctatgagcaacattgaatcttctcctgagggattcaacatgctt
agacgtatgtatgaaaatgtacaagagccattactgaatgcatcaaccatggccggtaat
actgggtttgatagttcaaatccattagcagctcttttcaccccccaaggtgggaaccca
accaggactcagttaacaaactcatcaactgctagttctgattcagcaactagtccccct
gctccaaacaccgtcccacttcccaacccatggtcacctacaggctgggatggtaggtcg
cagacaccagctggtcaaactggacttggctttccagaatttgaagccatgatgggtaca
acgcaggataacactttgctgaatcaggctgtacaaaacccagctgtttctcagctcatg
caaaacttcatctccaatcctcagagtattagcgagagtattcagtccgacccccagtta
cgaagcatgcttagttccaatcctctctttagagaaatgattcaaaaccatgaatttttt
cgtcagttggcttctcctgagactatgcagctattttttatgttaatacaagcacttttg
tcgcttctaggtgatgaagaagaacaagcaacccaggaaccgggagagacaggacagact
gatggaggcacaggaccagtcgataactcaggattacaggcgctgttgaacctgtttggt
gggcttggcactggcagcccagctgttcccaacagaccaagtgtgccaccggaagaactc
tatgctgcacagctttcacaacttcaggagatgggtttcttcgatagacaagagaacata
cgggctctgatgacctctgctggaaatgtccatgctgcaatagagcgactattggggaat
tcaggtcaatag
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