KEGG   Fragaria vesca (woodland strawberry): 101302011
Entry
101302011         CDS       T02666                                 
Name
(RefSeq) protein RRP45A-like
  KO
K03678  exosome complex component RRP45
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101302011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    101302011
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     101302011
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 101302011
NCBI-ProteinID: XP_004288603
LinkDB
Position
LG1:21711904..21719640
AA seq 465 aa
MEQRLANTWRMTVNEKKFIETALESGLRIDGRRPFDYRTVDIKFGKDDGSAEVHLGQTHV
MAFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPAEYAVELGRVIDRGLRESRA
VDTESLCILSAKLVWAVRVDLHILDNGGNLIDAANIAALAGLLTFRRPECSLGGENGQEV
IIHPPEEREPLHLIIHHLPIAVTFGFFSYESSVVIDPTHHEEAVMGGRMTATLNSNGDVC
AIQKAGGEGILQGVIMQCLRIAAAKAGAISDMIKKEVDSHNTQRALLKIKRHSSSVPMDV
DRGGSNLGLKQNSSVEMGVDEFSGHHVERLKQVPEEGIAYQSGGVESETISSDNTQINRS
NADTKNFIGGPSSWDPYSMGVDSDSLKASLGSQGMPMPIEKQNSKGEETTSKPEPEDAPE
DNNLKTSPLGEASAEQANGEKTLKDAVKAKNRKSRRKSRSSSGPS
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggagcagaggctggcgaatacatggcggatgacggtgaacgagaagaagttcatcgag
acggcactagagtcgggactccgaatcgacggccgccgtccgttcgactaccgcaccgtc
gatatcaagttcgggaaagacgacggctccgcggaggtgcacctcggccagactcatgta
atggccttcgtcaccgcccagctcgtccagccctaccgcgacaggcccaatgaaggcact
ctctccatcttcaccgagttctctcccatggccgacccttccttcgagcctggccgcccc
gccgagtacgccgtcgagctcggccgcgttattgaccgcggtctcagggagagccgggca
gttgatacggagtcgctctgtattctctctgccaaattagtatgggctgttcgtgttgat
ctccacattcttgataacggagggaatctcattgatgctgctaatattgctgcactggcc
ggtttgttgacgtttcggaggcccgagtgctcattggggggagaaaacggtcaggaagtc
atcatacatccacccgaggagagagagccgcttcatctaataatacatcatcttcctatt
gcagtaacttttggattcttcagttacgagagcagtgtggttattgatccgacccaccat
gaagaggctgttatggggggacgaatgaccgctacacttaactctaacggtgatgtttgt
gccattcaaaaggctggaggggagggcatcttgcagggtgttataatgcaatgtttgcga
attgctgctgccaaggctggtgccatctcagatatgataaagaaagaggttgattcacat
aacacacaaagagcattactgaagatcaagcgtcattcttcttctgtcccaatggatgta
gatagaggtggttctaacctagggttgaaacagaactcttctgttgagatgggagttgat
gaattttcagggcatcatgtggagagactaaagcaggtgccggaggaaggcattgcttat
caaagtggtggtgttgaaagtgaaactatatcgtcagacaacacacaaattaacaggagt
aatgcggataccaagaattttattggggggccctcaagttgggatccttactcaatgggt
gttgattcagattccttgaaagcttctctagggtcccaaggtatgccaatgcctattgag
aaacaaaactcaaaaggcgaggaaacaacaagcaaacccgagccagaggatgctcctgaa
gataacaatctaaagacttcaccccttggggaagcatctgcagaacaagcaaatggagag
aaaaccctgaaggatgctgtaaaggcgaagaacaggaaatccaggagaaagagtcgctcc
tcttctggtcctagctaa

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