Fragaria vesca (woodland strawberry): 101302118
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Entry
101302118 CDS
T02666
Name
(RefSeq) serine/arginine-rich splicing factor RS41
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101302118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101302118
Spliceosome [BR:
fve03041
]
Common components
Common spliceosomal components
SR proteins
101302118
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RNA_bind
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
101302118
NCBI-ProteinID:
XP_011470401
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Position
LG7:complement(22825571..22829319)
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AA seq
379 aa
AA seq
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MRPIFCGNFEYDARQNDLERLFGRYGKVDRVDMKAGFAFIYMDDERDADYAIRGLDRREF
GRKGRRLRVEWSKVSSHERGSRRPGASRRSSTITRPSKTLFVINFDPYHTRTKDLERHFD
PYGKIISVRIRRNFAFVQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERRDGYSP
DRRSRERSLERGRDRRRSPSPYKRERGSPDYGRGPSPGPYRRERGSPDYGRGTSPYRRER
ASPDYARGHSPSPYRRERSDHGRVSSRSPRKERVSADHGRDRSRSRSRSPYFGRDVAAAE
NGHARSPSPTPYKRTRASPENGHGPNSSPYEGDRANSPEEGRIPSPNSVPDAKDSPNYGG
PESPMHERYNSRSPQAEEE
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccattttttgtgggaattttgaatatgatgctcgacagaatgatctggagcgg
ctttttggaagatatgggaaagttgatagggtggatatgaaggctggttttgctttcatt
tacatggatgacgagagagacgctgactatgcgatacgaggactcgatcggagagaattt
ggtcggaaaggacgcaggcttcgtgttgaatggtcgaaggtatccagtcatgagcgtggc
tctagaagacctggtgcttcaagaaggtcttcaactatcacaagaccatcaaagaccttg
tttgttataaattttgatccatatcacaccaggaccaaggatttggagaggcattttgat
ccatatgggaaaataataagtgtaaggatccgaaggaacttcgcttttgttcagtatgag
tcacaggaggatgctactagggcactggaggctacaaacatgagcaagctgatggaccga
gttatatcagttgaatatgcagttcgtgatgatgatgaaagaagagatggctatagccct
gacaggagaagtcgtgagaggtcactagagagaggccgtgacagaagacgttccccaagt
ccctacaaaagagagaggggaagtcctgattatggccgtggccctagtcctggtccatac
cgaagggagaggggtagtcctgattatggacgtggcacaagtccttaccgaagggaaaga
gcaagccctgactatgcccgtgggcatagccctagtccttataggagggagagatctgat
catgggagggtctccagtcgtagtccccgaaaagagagggtgagtgctgatcatggccgt
gaccgcagccgcagccgcagccgtagcccttattttggaagagatgtggctgctgctgaa
aatggtcacgctcgaagccctagtcctactccttataagagaactagagctagccctgaa
aatggtcatggtcccaacagtagcccttatgagggagatagagccaacagcccggaggaa
ggtcgcattccgagtcccaactcagtgcccgatgccaaggacagccccaattatggtggg
cctgaaagccccatgcatgagagatataacagtcggtcaccccaagccgaggaggaatga
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