Fragaria vesca (woodland strawberry): 101302160
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Entry
101302160 CDS
T02666
Name
(RefSeq) heat stress transcription factor A-5
KO
K09419
heat shock transcription factor, other eukaryote
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fve03000
]
101302160
Transcription factors [BR:
fve03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
101302160
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
DivIC
DUF3450
APG6_N
LegC3_N
CENP-F_leu_zip
Seadorna_VP6
TMF_TATA_bd
WWC1
Phlebovirus_NSM
DUF4407
Motif
Other DBs
NCBI-GeneID:
101302160
NCBI-ProteinID:
XP_004298212
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Position
LG4:complement(14062501..14065729)
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AA seq
578 aa
AA seq
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MTNLPTTFPNRIWRRMTWHRTKENRPFWKSWVFFKSTLVGCRHKPSNVFYSILGSLSHLV
PIPASSFSLSLSLSLSLPLHFITTHSDPKSSRSHRIPDPRLMDGTAGGGGGGGGPAPFLL
KTYDMVDDSATDEIVSWSSNKKSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRK
IDPERWEFANEEFIQDQKHLLKNIHRRKPIHSHSNPQGSMVDQERAALDDEIEKLSNEKA
ALEANISRFQQQRSAEKLQLEDLTQRVNGMEQRQKNLHTFLDKAVQNPFFVEHLARKIES
MDFSAYNKKRRLPVAELSQPVVENSFMDNQSSSRPEFGNIFHQDFSSKLRLELSPTVSDI
NPVSHSTQSSNEDGDSSTRKISEDLKGAQMRTKGLLFANEPLELSDTGTSFAFKMDSVSR
KSTSGGSPGFHSLQPGLPSNEDSDGLIACHLNLTLSSSPLKVISSPHSATVPLIGQDISN
SPSSGLNANDKESDIRALLHHNLADEDRPKNSPKEATKHSKGHASGPVRVNDVFWEQFLT
ERPGCSENEEASSNFKENLYDGHDRMARNAKGTETLTL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatctacctaccactttcccaaaccgaatttggaggaggatgacgtggcatcgg
acaaaagaaaatcgtccgttttggaaaagttgggtattcttcaagtcaactctggttggc
tgccggcacaaaccttcgaacgtcttctattctattctcggctctctttcccaccttgtt
ccaatccccgcttcctctttctctctctctctctctctctctctctctcttcccttacac
ttcatcacgacccattccgaccccaaatcaagtcggtcccaccgaatccccgacccccga
ctaatggacggaaccgcgggtggcggcggaggaggcggcggtccggcgccattcttgctg
aagacgtatgacatggtggacgactcggcgacggacgagatcgtgtcgtggagctccaac
aagaagagctttgtcgtctggaaccctccagaattcgctaggcttctcctccccacctac
ttcaagcacaacaacttctctagcttcatccgtcagctcaatacctacggatttcgaaag
attgatcctgaaagatgggagtttgctaatgaagaattcatacaagatcaaaagcatctt
cttaagaatattcatcgcagaaagcccattcacagccacagtaatccccagggttctatg
gttgatcaggaaagagcggctcttgatgatgaaatagagaagctatcaaatgaaaaagct
gcacttgaggcaaacatttcaaggttccagcagcagcgatctgctgaaaagcttcagttg
gaagacctgacacagcgggtaaatggtatggagcagaggcagaagaatttacatacattc
ttagataaagctgttcagaaccctttttttgttgaacatctagcccgaaaaattgaatct
atggatttctcagcgtataacaagaaaaggagactgcctgttgcagaactctcacagccg
gttgtggaaaatagtttcatggataaccaaagtagttccagacctgagtttgggaatatt
ttccaccaagacttttcaagtaagctgagactggaattatctccaactgtttcagatatt
aatccggtttcacatagcacccagagttccaatgaagatggggatagttcaactaggaag
atatcggaagatctgaaaggtgcacagatgagaaccaaaggccttttatttgcaaatgaa
ccattagaactttcagatactggaacatcctttgcattcaaaatggattcggtgtcacga
aaatcaacaagtggtggaagccctggatttcattccttgcagccaggtttgccatcaaat
gaggatagtgatggcctgatagcctgtcacttaaatcttacattatcatcttctcccttg
aaagtgatcagtagcccgcattcagctacagtacccctaataggtcaggatattagcaac
tccccatcctcaggtttgaatgccaatgacaaagaatccgatatcagagctcttctgcac
cataacctggctgatgaagacaggcctaaaaattccccaaaagaggccacaaaacacagt
aaagggcatgcatctggtccagttagagtgaatgatgttttctgggagcagtttctcacg
gaaaggcctggctgttcagagaatgaagaagcgagttctaattttaaagaaaatctgtat
gatgggcacgatagaatggccagaaatgctaaaggtacagaaacacttactctttga
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