Fragaria vesca (woodland strawberry): 101302167 Help Entry 101302167         CDS       T02666                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism fve  Fragaria vesca (woodland strawberry) Pathway fve03430   Mismatch repair Brite KEGG Orthology (KO) [BR:fve00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     101302167  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:fve03400]     101302167 DNA repair and recombination proteins [BR:fve03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      101302167 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor LBR_tudor Tudor_5 CDC45 Motif Other DBs NCBI-GeneID:  101302167 NCBI-ProteinID:  XP_011465355 LinkDB All DBs Position LG5:complement(24960300..24967726) Genome browser AA seq 1252 aa AA seqDB search MSSRRRSNGASPLINPQRQITSFFAKATSSPSPSPSPIPKSNSSPSPSPSPLESKPSPTK CYGEEVVGKRIKVLWPADRAWYKGCVKSFNKEKTSHLIQYDDGDEEELNLSLEKFELLQD TVTNLKRLRRGPLPTTPDAPVAVAEEEDKDESHEDDDSGDEDWGKSAEKEVVEEEEDETM ELEDEEDSDEGVPKSKGKRGGGSGKRKLSGGGNLGSAKKTKSGGDVVTNGLKANLTEPTT EAESTKAVNGIKIGDASERFSMREAEKFRFLGEKRRDAKKRCPGDPNYDPRTLYLPPDFL KSLSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPE KNFSMNVEKLARKGYRVLVIEQTETPEQMEVRRKEGGSKDKVVKREVCAVVTKGTLTEGE MLSANPDASYLMAVTETSQNLVNQNAERVFGVCVVDVATSRVILGQFPDDLECSALSCLL SELRPVELVKPAELLSPEAEKVLLRHTRNPLVNELVPLLEFWDAEKTVCEVKSTYSRADD SQMEEDGFSCLPDVLSELIGARENGICALSALGGALFYLKQAFLEETLLRFAKFELLPSS GFGGIISKPYMVLDAAALENLEIFENSRNGDSSGTMYAQLNHCVTAFGKRLLKTWLARPL YHVESIKERQDAVSSLRGINLPHALDFRKSMAKIPDMERLLARVFASSKARGRNANKVVL YEDAAKKQLQEFISALRGCDLMATAICSLGANLENVESQQLHHLLTPGKGLSNVNSVLKH FKDGFDWVEANSSGRIIPREGVDNEYDSACGKVKEIESHFMMYLKEQRKLLGDKSITYVT IGKDTYLLEVPESLGGSVPQDYELRSSKKGFFRYWTPNIKKSLTELSQAESERESSLKNI LQRLIGQFCEHHIKWRQLVSVTAELDVLISLAIASDYYEGPTCRPVIMSSSDTEEVPLFS AKSLGHPVIRSDSLGKGTFVPNNITLGGTGHASFILLTGPNMGGKSTLLRQVCLAVILAQ LGADVPAESFELSPVDRIFVRMGAKDHIMVGQSTFLTELSETATMLSSATRNSLVALDEL GRGTSTSDGQAIAESVLEHFVHKVHCRGMFSTHYHRLAVDYQNNSQVSLCHMACRVGNGD EGVEEVTFLYRLTRGACPKSYGVNVARLAGLPISVLQKAAAKSREFEAAYGKHLEQSEDS FPFQSPADKIVECFIKFTNTVAKLTSHESTEGIDIDSLTEVWHDARLLEQQS NT seq 3759 nt NT seq  +upstreamnt  +downstreamnt atgtcgtcacgccgtcggagcaacggcgcgtccccattgatcaacccgcagcgccagatc acttccttcttcgccaaagccacttcttctccatctccatctccatctccaatccctaaa tctaactccagcccttctccttcgccttcgcctctggaatcgaagcccagtccgacgaaa tgttacggcgaagaggtcgtcgggaagaggatcaaggtgctctggccggctgatagggcc tggtacaaaggctgtgtcaagtccttcaataaggagaagactagtcacttgattcagtac gacgatggtgacgaagaagaattgaatttgtctctggagaaattcgagttgcttcaagac actgttacgaacttgaagcgcttgcgccgaggtcctttgccgacgactcccgacgccccg gtggcggtggcggaggaggaggacaaggacgagagtcatgaagatgatgattccggcgat gaggattggggaaagagtgcggagaaggaagtggttgaggaggaggaagacgagactatg gaattggaggatgaggaagatagtgacgagggagtgcccaagtccaaaggaaagcgcggc ggcggctccggtaagcgaaagttgagcggcggagggaacttggggtctgctaagaagacc aagagtggtggagatgtagttactaatggcctcaaggctaatttgactgagcctactact gaggctgagagcacaaaggctgttaacggtatcaaaattggtgatgcctcagaacgattt agcatgcgtgaagctgagaagttccgtttccttggggaaaaacgccgggatgccaaaaag agatgtcctggggatccaaattatgatccacgaactctgtatctacctcctgatttctta aagagtctatcaggtggccagaggcaatggtgggagtttaagtcaaagcacatggacaaa gttctctttttcaagatgggcaagttttatgaacttttcgaaatggatgcacatatagga gctaaagaacttgatcttcaatatatgaagggcgaacaaccccattgtggatttccagag aagaacttttcaatgaatgtggagaaactggctagaaagggttaccgagttcttgtcata gagcagacagaaacacctgaacagatggaggttcgtcgcaaagagggtggctctaaagat aaggttgtgaaacgtgaagtatgtgcagtagttacaaaaggaacactaactgagggagag atgctgtccgcaaaccctgatgcttcttatctaatggcagtgactgaaacctctcaaaat ttagtaaaccaaaatgccgagcgtgtttttggagtttgtgtggttgatgttgctaccagc agggttattcttggacagtttccagatgatttagagtgcagtgctttgtcttgtctattg tctgaattgaggcctgtggaactagtaaaacctgcagaactgcttagtcctgaggcagaa aaagtactgctgaggcatacaagaaatccactagtgaacgagttagttccacttttggaa ttctgggatgctgagaaaactgtttgtgaagtgaaaagtacctatagccgtgcagatgat tctcaaatggaagaagatggcttcagctgcttgccagatgtgttgtctgagctgattgga gccagggagaatggcatctgtgcactttcagctcttggaggtgctcttttctacttaaag caggctttcctggaagagacattgcttaggtttgcaaaatttgagttacttccaagttct ggttttggcggtatcatatcaaaaccatacatggttctcgatgctgctgctctagagaac cttgagatttttgagaacagcagaaatggagactcttcagggacaatgtatgcacaattg aatcactgtgtgaccgcttttgggaagagattacttaagacatggcttgcgagacctctg tatcatgtagagtcaattaaggaacgccaggatgccgtctcaagtttacggggaatcaac cttcctcatgcacttgattttcgaaaatcaatggctaagattccagacatggagcgtttg cttgcacgggtctttgctagcagtaaagctagaggaaggaatgctaacaaagtggtttta tacgaggacgctgccaaaaaacagctccaggagtttatttcagctttacgcggttgtgac ctaatggcaacagcaatttgctctcttggtgccaacttggaaaatgttgaatctcaacaa cttcatcatttgctgacacctggtaaaggtctttctaatgtcaactcagttctaaaacac ttcaaggatggctttgattgggtagaagccaatagttcaggtcgtataatacctcgtgaa ggagtcgataatgaatatgattctgcatgtggaaaagtgaaagagatcgagtctcatttc atgatgtaccttaaggaacagagaaaattactcggagataaatctatcacttacgttaca attggaaaagacacatacctattggaagttccagaaagtttgggtgggagtgtacctcag gattatgaattacgttcatccaaaaagggtttctttaggtattggacaccaaatattaag aagtcattgacagagctctcacaagctgaatccgaaagggagtcctcacttaaaaacatt ttgcagaggttaattggacaattctgtgagcatcatataaagtggagacaattggtctct gtgactgctgaactggatgttttaatcagcctagcaattgcaagtgattattatgaggga cccacctgtcggcctgttatcatgagttcatcagatacagaagaagtacccctcttctct gcaaagagtttgggacatcctgttattagaagtgattctttaggaaaaggtacatttgtc cccaacaacattactcttggaggtactggtcatgcaagctttatccttctcactggccct aacatgggtgggaagtcaactctgcttcgccaagtttgcttggctgtgattttagcccag ttaggagcagatgtgcctgctgagagctttgagctatctcctgttgatcggatctttgtt cggatgggtgccaaagatcatatcatggtaggccaaagtacatttcttacggagctttca gaaactgcaacaatgctgtcatctgctactcgtaactcattggtagcactagatgaactt ggacgtgggacgtcaacttcagatggacaagccattgcggaatcagttcttgaacatttt gtccacaaggttcactgtcgaggaatgttttctacacactatcacagactagccgttgat tatcaaaataattctcaggtttcgctctgccatatggcatgccgagttggaaatggagat gaaggtgtggaagaagtgacatttctttacaggttgactcgcggtgcttgtcctaaaagc tatggtgtcaacgtcgcccggttagctggacttcctatttctgtacttcaaaaagctgcc gctaagtccagggaattcgaagctgcatatggtaaacacttggagcaatctgaagatagc tttccctttcaaagtccagcagacaagattgttgagtgcttcataaagttcaccaacact gtggcaaagttgactagtcatgaatctactgagggcattgacattgactccctgactgaa gtttggcatgatgcaagattgcttgagcaacaaagttga

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