Fragaria vesca (woodland strawberry): 101302249
Help
Entry
101302249 CDS
T02666
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101302249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101302249
03110 Chaperones and folding catalysts [BR:
fve03110
]
101302249
03029 Mitochondrial biogenesis [BR:
fve03029
]
101302249
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
101302249
Enzymes [BR:
fve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101302249
Messenger RNA biogenesis [BR:
fve03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101302249
Chaperones and folding catalysts [BR:
fve03110
]
Heat shock proteins
HSP60 / Chaperonin
101302249
Mitochondrial biogenesis [BR:
fve03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101302249
Exosome [BR:
fve04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101302249
Exosomal proteins of other body fluids (saliva and urine)
101302249
Exosomal proteins of breast cancer cells
101302249
Exosomal proteins of colorectal cancer cells
101302249
Exosomal proteins of bladder cancer cells
101302249
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
TAL_FSA
Motif
Other DBs
NCBI-GeneID:
101302249
NCBI-ProteinID:
XP_004295490
LinkDB
All DBs
Position
LG3:5633034..5637374
Genome browser
AA seq
585 aa
AA seq
DB search
MSVSLSSSQLFFYTPLFSLQSFSQKQRVGGFWRKPQALRSLEVRAGPKKISFGKECREGL
QIGIDKLADAVSLTLGPKGRNVVLSESDKVRVINDGVTIVQSIELADTIENAGAMLIQEV
ASKMNNLAGDGTTTAVILTREMIRGGLLAVAFGANPISLKKGMEKTVTELLEVLKEKSLP
VKGRKDIKAVASISAGNDEFIGNLIAEAIEKIGPDGVISIESSSSFETSVLVEEGLKFDK
GYMSSHFITNQERSVVEFDKAKVLVTDQKISSVKEIVPLLEKITQLSIPLLIIAEDISKP
VLETLVVNKMQGLLNVAVVKCPGFGERKKALLQDIALMTGADFLSGDFGFTLDSATSDQL
GIARKVTITSNSTTIVADPSTKAEIQARILQIKKDLAETENANLSRKLSERIAKLCGGIA
VIKVGAHTEVELEDRKLRIEDAKNATFAAMEEGVVPGGGATYVHLSESIPVIKNSMEDSD
EQFGADIIAKALLAPAKSIATNAGDDGEVVVEKTKDCDWRIGYNAMTGRYEDLPDAGVLD
PCRVSRCALQIAVSIAGVVLTTQAVLVEKTKTKKPAIPSVPGITP
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctctctgtcttcctctcagctcttcttttacacacctctcttctctctgcag
agcttttctcagaaacaaagagtaggtgggttttggagaaagccacaagctttgaggagc
cttgaggtgagagcaggcccaaagaagatatcttttggtaaagaatgcagggagggattg
caaattgggatagataagcttgctgatgctgtttctcttacattaggacctaaaggacgt
aatgttgttctttctgagtctgataaagtgagagtgattaatgatggggtgacaattgtt
cagtccatagagctagcagatacaattgagaacgcgggagcaatgctaatccaagaggtt
gcaagtaaaatgaataatttggccggtgatggtactaccactgcagttattttgacacga
gaaatgatcagaggtggattattagcagtagcttttggggctaaccctatttccttgaag
aaaggaatggagaagactgttactgaactgctcgaggttttgaaggagaaaagtcttcct
gtgaaaggaaggaaggatattaaagctgtggcttcaatttctgccggaaatgatgaattc
attgggaacttgattgcagaagctatagaaaagattggtcctgatggagtgatctcgatt
gagtcgtcctcatcatttgaaacgtctgttttagtcgaagaaggactcaagtttgacaag
ggttacatgtcctcccacttcattactaatcaagaaagatctgttgtggagtttgacaag
gctaaggtcctggtaactgatcaaaagatttcatctgttaaagaaattgttcctttgctg
gaaaagataacccaattgagtatcccgctgctaatcattgcagaggatatctcaaagcca
gtgctggaaacactggtggtgaataaaatgcagggtttacttaatgttgctgttgttaag
tgccctggatttggagagcggaagaaagctcttttgcaagatattgcactgatgacaggt
gctgattttctctctggagattttggttttacccttgacagtgcaacatcagatcaactt
ggaattgcaagaaaggtgacaataacaagtaattcaacaaccatagttgctgacccttct
accaaagcagagattcaggcaagaatattgcagatcaagaaggatctagcagaaactgaa
aatgcaaacctgtcgagaaagctctctgaaagaattgctaaactctgtggtggtattgct
gtaattaaggtaggagcacatactgaggtggaacttgaagatcgcaaactcagaattgag
gatgcaaagaatgccacatttgctgctatggaggaaggggtagtgcctggtggtggtgcc
acttatgtacatctgtcagaatcgattcctgtcataaagaattctatggaagattcggat
gagcagtttggtgccgacattatagccaaggctctccttgctcctgcaaaatcaattgca
actaatgctggggatgatggagaagtagttgtggagaagacaaaagattgtgattggaga
attgggtacaatgccatgactggcaggtatgaagatcttccagatgcaggagttttagat
ccttgtcgagtttcaagatgtgcccttcaaattgcagtctccattgctggggtggttctc
actactcaagctgtattggtggagaaaaccaagacgaaaaagccagcaattccttctgtt
ccagggataactccttag
DBGET
integrated database retrieval system
