Fragaria vesca (woodland strawberry): 101302262
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Entry
101302262 CDS
T02666
Name
(RefSeq) AMSH-like ubiquitin thioesterase 2
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101302262
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fve01002
]
101302262
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101302262
04121 Ubiquitin system [BR:
fve04121
]
101302262
Enzymes [BR:
fve01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101302262
Peptidases and inhibitors [BR:
fve01002
]
Metallo peptidases
Family M67
101302262
Membrane trafficking [BR:
fve04131
]
Endosome - Lysosome transport
Others
Others
101302262
Ubiquitin system [BR:
fve04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
101302262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
101302262
NCBI-ProteinID:
XP_011463355
LinkDB
All DBs
Position
LG4:complement(21697222..21700619)
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AA seq
270 aa
AA seq
DB search
MAERNLLSLRIINGEQATLSSLDSVESGSSCLACKFFAPSELQNITVHAVTQCTPSPLIS
CTASMPQGATVSQITAANSEQLCDQSSSSSRVLRDVHISARLMEDFLQLAKENTDKDLET
CGTLGAFLKNETFYVTTLIIPKQESTSSSCQAINDEEVFAIQNEQSLFPAGWIHTHPSQS
CFMSSVDLHTHYSFQVMVPEAFAIVMAPTDTSRSYGIFRLSEPGGMNVLKECQEEGFHTH
KETTDGSPIYEHCSNVYTNSNLRFEIFDLR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagaaaccttttaagcttgagaatcatcaatggggaacaagctactttgtca
tcgttggattcagtggaatctggcagtagttgcttggcttgtaaattttttgctccaagc
gaattgcagaatattacagttcatgctgttacgcaatgcaccccttctcctttaatctcc
tgcacagcaagtatgcctcaaggtgctactgtctcacaaattacagccgccaattcagaa
cagctgtgtgatcaatcatcatcatcatctagagtactgcgagatgtacatatctcagct
cggttaatggaagatttcctgcagcttgctaaagaaaatacagacaaggatcttgaaaca
tgtggaactcttggcgcctttcttaaaaatgaaacattctacgtgacgacgctgatcata
cccaagcaggaatccacttccagctcttgtcaggcaataaatgacgaggaagtctttgca
atacaaaatgaacaatcactttttccagcaggatggatccatacgcatccttctcagagt
tgtttcatgtcatcagtggatttacacacacattattcatttcaggttatggtacctgag
gcttttgccattgtcatggccccaactgatacttcaagaagctatggaatattccggcta
tctgagcctggtgggatgaatgtcctgaaagagtgccaagaggaagggttccacactcac
aaagaaacaacagatgggagtcctatctacgagcactgctccaatgtctacacaaactca
aatctgaggtttgaaatcttcgacttacgttga
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