Fragaria vesca (woodland strawberry): 101302302
Help
Entry
101302302 CDS
T02666
Name
(RefSeq) uncharacterized LOC101302302
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101302302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101302302
03019 Messenger RNA biogenesis [BR:
fve03019
]
101302302
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101302302
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101302302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
101302302
NCBI-ProteinID:
XP_004288604
LinkDB
All DBs
Position
LG1:22042426..22050987
Genome browser
AA seq
577 aa
AA seq
DB search
MIPHYNTFHQNSGQAHPASGNGDISVPSPQQQQGMPFNTALANSCNMLPPSMGPQPGFMN
LSNNIVPMQNNHMFMPMSPFGSLGPISQPGHPGVGFSVPQSNAVNMNLAASYPLNGQFCN
MAQTVNQVNPNMGFLPGQLFAHNLLNLQQMNQNIGPYGQFCLPNLLNKNQVVPMQMQNPG
QGGPYYAFGGINQAAQAGVPQNPAFFTTPNFGNVHSPNQARQQINQNQQNNSVQGTQGNH
IKAGGVYNSNSDRKSSPSKSFIKHPKQGLQQQGGFQNSQFHHNKNAKGKFAFPNRQNTKE
AGLSNEKGKSARADSMDHSRERKSERCLSLSYTEQEVQLWREGRRKNYPSNTNIEKKLSE
KMMDSVAIQREATARKEQLKEILTKQAEMGLEVADIPSHYLSDSEKQGNRREENRSWKNN
CRSQNKFGKRDRFDKKDRFAKRQRSSQKDSSSDPSFCKREPTLLQKLLSSDIKRDKSRLW
QVFRFMVTNSFLKDFPDKPLKFPTVVVKESVVEEDVVEELSSVAGKGAYEGPDKSMVEIL
NNNDYIDSSYNDVHVEDDDEDEEVIERPEEEEGEIIN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgatacctcactacaatacctttcaccaaaattccggccaagctcacccggccagcggt
aatggtgatatctctgttccatctcctcaacagcagcagggcatgccatttaatacagca
ctggcaaattcgtgtaatatgttgccaccgtccatgggacctcagcccggtttcatgaat
ttgtctaacaacattgttccaatgcaaaacaaccacatgtttatgcctatgtccccattc
ggttcccttggtcctatatctcaaccaggtcatcctggtgttggattttccgttccacag
agtaatgcagtcaatatgaacttggctgcttcctatccgcttaatgggcagttctgcaac
atggcgcagactgtcaatcaagtgaatccaaatatgggttttctacctggtcaattgttt
gctcataacctgttgaatttacagcagatgaatcaaaatattgggccatatgggcagttc
tgtttgccgaatctgttgaataagaatcaggttgtgccaatgcaaatgcaaaaccctggc
caaggtggtccttattatgcatttgggggaataaatcaagcagctcaggctggtgttccg
caaaatcctgctttttttacaactcctaattttggtaatgtgcactctcctaatcaagcc
agacaacaaatcaaccagaatcagcaaaacaacagtgtccaagggacacagggtaatcat
ataaaagctggtggcgtttacaattccaattctgacagaaaaagttcgccaagcaaaagt
ttcataaagcatccaaaacaagggttgcagcagcaagggggatttcagaattctcagttt
catcataacaaaaatgcaaagggaaagtttgcttttcccaataggcaaaacacaaaagaa
gcagggctaagcaatgagaagggaaaatctgctcgtgccgactctatggatcacagcagg
gaaaggaaaagtgaaagatgtctttctttgtcctatacggaacaagaagttcaactctgg
cgtgaaggacgtaggaagaactacccatcaaacaccaacatagagaagaagctaagtgaa
aagatgatggactcggtggccattcagagagaggccacagcacgaaaggagcaactcaag
gagattcttacaaagcaggctgagatgggacttgaagtcgctgatataccatctcactac
ctatcagactcagaaaaacaagggaatagaagagaggagaataggtcatggaaaaacaat
tgtagatcacaaaacaagtttggtaagagagacagatttgataagaaggaccggtttgca
aagaggcaaaggtcaagtcagaaggattcatctagtgacccttcattctgcaaaagggag
ccaaccttactgcagaagcttcttagttcagatatcaagagagataaaagtcgcttatgg
caggtgtttaggttcatggtgacaaactcttttttaaaagattttcctgacaaacctttg
aaatttccaactgtggtagttaaagaaagtgtggtggaggaagatgtggttgaagagttg
tcttcagttgccgggaaaggtgcctatgaaggacctgacaagtccatggttgaaattctt
aataacaatgattatatagattcttcttacaatgatgttcacgttgaagatgatgatgaa
gatgaagaggtaatagagagacctgaggaagaagagggagagatcatcaactag
DBGET
integrated database retrieval system