Fragaria vesca (woodland strawberry): 101302390
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Entry
101302390 CDS
T02666
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101302390
03041 Spliceosome [BR:
fve03041
]
101302390
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101302390
Spliceosome [BR:
fve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101302390
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Ortholog
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GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_5
Motif
Other DBs
NCBI-GeneID:
101302390
NCBI-ProteinID:
XP_011460937
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All DBs
Position
LG1:6975123..6983440
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AA seq
405 aa
AA seq
DB search
MQQQQQQAMMQQSLYQHHPALLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTETL
LQEVFASTGPLEGCKLIRKDKSSYGFVDYYDRRSAALAIVSLNGRHLFGQPIKVNWAYQS
SQREDTSGHFNIFVGDLSAEVTDATLFACFSAYPSCSDARVMWDPKSGRSRGFGFVSFRN
QQDAQSAINDLNGKWLASRQIRCNWATKGATSNDDKQSSDSKSVVELTNGTSEDGQEKPN
EDAPENNPQYTTVYVGNLAPEVTQTELHRHFHLLGAGTIEDVRVQRDKGFGFVRYSTHSE
AAAAIQMGNARFLCGKAIKCSWGSKPTPPGTVSSPLAPPAAAYMPGFSAADLAAYERQMA
YSKMGGPQGLMLPQGQHGLNAGASQAIYDGGYQNIATSQQLMYYQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcagcagcaacaagccatgatgcagcagtcgctttatcaacaccaccctgct
ctcttagccccgcctcagatagagcctatcttgagtggaaatctgcctcccgggtttgat
tcaagtacatgccgcagtgtgtatgttggaaatattcatccacaggttactgaaaccctt
cttcaagaagtttttgccagtactggcccacttgagggatgcaagctcataaggaaagat
aagtcatcctatggatttgttgattactatgatcgccgatcagctgcccttgctattgtt
tctctcaatggcaggcatctgtttggacagccaattaaagttaattgggcatatcaaagt
agtcagagggaggatacttcaggtcattttaatatttttgttggtgatcttagcgctgag
gttaccgatgctacattgtttgcatgcttttctgcttaccccagttgctcagatgcaagg
gttatgtgggatccaaagagtgggcgctcaaggggttttggatttgtttcgttccggaat
cagcaggatgctcaaagtgctataaatgacttaaatggaaagtggcttgcaagtaggcaa
attcggtgcaactgggctacgaaaggtgctacttcaaatgatgataaacagagttctgat
tctaaaagtgttgtagagctgacaaatggaacatcagaagatggtcaggagaagcctaat
gaagatgctccagagaataatcctcagtataccaccgtttatgttggcaatctggctcct
gaggttactcaaactgaactccatcgtcatttccatctccttggtgctggaactattgaa
gatgttagggtgcaacgtgataaaggttttgggtttgtgagatacagtacacattctgaa
gcagctgcagctatccagatggggaatgctaggtttttgtgtggaaaagcaataaagtgt
tcatggggtagcaagcctactccaccaggaactgtctccagccctctagctccaccagct
gcagcttatatgccgggtttttcagcggcggaccttgcagcatatgaacgacaaatggca
tatagtaaaatgggcggtccacaaggcctcatgcttccccagggtcagcatggtctgaat
gctggagctagtcaggcgatatacgacggtggctaccagaatatagcaacatcccagcag
ctcatgtactaccagtag
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