KEGG   Fragaria vesca (woodland strawberry): 101302411
Entry
101302411         CDS       T02666                                 
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP
  KO
K09561  STIP1 homology and U-box containing protein 1 [EC:2.3.2.27]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve04120  Ubiquitin mediated proteolysis
fve04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101302411
   04120 Ubiquitin mediated proteolysis
    101302411
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:fve03110]
    101302411
   04131 Membrane trafficking [BR:fve04131]
    101302411
   04121 Ubiquitin system [BR:fve04121]
    101302411
Enzymes [BR:fve01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101302411
Chaperones and folding catalysts [BR:fve03110]
 Other chaperones and cochaperones
  Others
   101302411
Membrane trafficking [BR:fve04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    101302411
Ubiquitin system [BR:fve04121]
 Ubiquitin ligases (E3)
  U-box type E3
   101302411
  Multi subunit type E3
   STUB1-CHIC2  complex
    101302411
SSDB
Motif
Pfam: U-box TPR_1 TPR_2 TPR_11 TPR_16 TPR_BSK1_C ANAPC3 TPR_8 TPR_17 TPR_12 zf-NOSIP TPR_14 TPR_9 TPR_19 zf-Nse ARM_TT21_C ACS_CODH_B_C UQCC3
Other DBs
NCBI-GeneID: 101302411
NCBI-ProteinID: XP_004290154
LinkDB
Position
LG2:8827788..8831712
AA seq 275 aa
MVVPGALSTAEKLRKDGNSYFKKDRFAAAIDAYTEAITLCPNVPVYLTNRALCHLKRNDW
TRVEEDSRKAIQLDSNCVKAHYMLGLALLQKQEYPEGVKELERALDLGRGADPKGYMVEE
IWQELAKAKYMEWEEASSKRAWELQSLKEACETALKEKHDAFQMEGFLDEAGTTHMRQLE
ALDRVFEKAAEADTASEVPDYLCCKITLDIFRDPVITPSGVTYERSVILNHLEKVGNFDP
ITREPVDPSQLIPNFAIKEAVEAYLKEHGWAYRTW
NT seq 828 nt   +upstreamnt  +downstreamnt
atggttgttcccggggcattgtctacggcggagaagctccggaaagacggcaactcctac
ttcaagaaggatcgtttcgcggccgccatcgatgcctacactgaggcaatcacgctgtgc
cctaatgtccctgtttatctcacgaatcgcgctctgtgtcatctcaagcgtaatgattgg
accagagtggaagaagattccagaaaagctattcagctagacagtaattgcgtcaaggcc
cactatatgctggggcttgcattactacagaagcaagagtatcctgaaggagttaaggaa
ttggagagggctttggatcttgggagaggtgctgatcctaagggttatatggtagaggag
atatggcaggagcttgcaaaggcaaaatacatggagtgggaagaggcatcgagtaaacgt
gcatgggaattgcaaagcttgaaagaagcttgtgaaactgcactcaaagagaaacatgat
gcttttcagatggaagggtttctggatgaagctggtactacccatatgagacagttagag
gctttagatagagtgtttgagaaagctgcagaagccgacacagcaagtgaggtgccagat
tatctatgttgtaaaatcactcttgatatatttcgtgatcctgtaattacaccaagtggt
gtcacatatgagagatcagtgatcctgaaccatcttgagaaggtgggtaattttgatcct
atcactcgtgagccagtcgatccatcacagctaataccaaattttgccataaaagaagca
gtggaagcgtatttgaaagaacatggttgggcctatagaacgtggtaa

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